Gene : AT4G00234 A. thaliana TAIR10
Defline:  (1 of 2) PTHR30566:SF5 - MECHANOSENSITIVE ION CHANNEL PROTEIN 1, MITOCHONDRIAL Genomic Order:  29
Name:  ? AT4G00234 Secondary Identifier:  ? PAC:19646484
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G00234 0.5kb upstream 0.5kb upstream 1370 true Chr4: 100419-101788 Arabidopsis thaliana
AT4G00234 0.5kb upstream 0.5kb upstream 500 false Chr4: 100419-100918 Arabidopsis thaliana
AT4G00234 0.5kb downstream 0.5kb downstream 1370 true Chr4: 100919-102288 Arabidopsis thaliana
AT4G00234 0.5kb downstream 0.5kb downstream 500 false Chr4: 101789-102288 Arabidopsis thaliana
AT4G00234 1.0kb upstream 1.0kb upstream 1870 true Chr4: 99919-101788 Arabidopsis thaliana
AT4G00234 1.0kb upstream 1.0kb upstream 1000 false Chr4: 99919-100918 Arabidopsis thaliana
AT4G00234 1.0kb downstream 1.0kb downstream 1870 true Chr4: 100919-102788 Arabidopsis thaliana
AT4G00234 1.0kb downstream 1.0kb downstream 1000 false Chr4: 101789-102788 Arabidopsis thaliana
AT4G00234 2.0kb upstream 2.0kb upstream 2870 true Chr4: 98919-101788 Arabidopsis thaliana
AT4G00234 2.0kb upstream 2.0kb upstream 2000 false Chr4: 98919-100918 Arabidopsis thaliana
AT4G00234 2.0kb downstream 2.0kb downstream 2870 true Chr4: 100919-103788 Arabidopsis thaliana
AT4G00234 2.0kb downstream 2.0kb downstream 2000 false Chr4: 101789-103788 Arabidopsis thaliana
AT4G00234 5.0kb upstream 5.0kb upstream 5870 true Chr4: 95919-101788 Arabidopsis thaliana
AT4G00234 5.0kb upstream 5.0kb upstream 5000 false Chr4: 95919-100918 Arabidopsis thaliana
AT4G00234 5.0kb downstream 5.0kb downstream 5870 true Chr4: 100919-106788 Arabidopsis thaliana
AT4G00234 5.0kb downstream 5.0kb downstream 5000 false Chr4: 101789-106788 Arabidopsis thaliana
AT4G00234 10.0kb upstream 10.0kb upstream 10870 true Chr4: 90919-101788 Arabidopsis thaliana
AT4G00234 10.0kb upstream 10.0kb upstream 10000 false Chr4: 90919-100918 Arabidopsis thaliana
AT4G00234 10.0kb downstream 10.0kb downstream 10870 true Chr4: 100919-111788 Arabidopsis thaliana
AT4G00234 10.0kb downstream 10.0kb downstream 10000 false Chr4: 101789-111788 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121494800 5273 Angiosperm Singleton cluster - no MSA
122330597 5261 Brassicaceae Singleton cluster - no MSA
123771831 5264 Brassicales-Malvales Singleton cluster - no MSA
124270355 5266 SBM Singleton cluster - no MSA
124126437 5268 Malvidae Singleton cluster - no MSA
123855347 5270 Rosid Singleton cluster - no MSA
123441333 5271 Pentapetalae Singleton cluster - no MSA
122476918 5272 Eudicot Singleton cluster - no MSA
120768168 5274 Embryophyte Singleton cluster - no MSA
122810558 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.032     Low  
cufflinks 0.018     Low Low
cufflinks 0.049     Low  
cufflinks 0.054     Low High
cufflinks 0.036     Low  
cufflinks 0.018     Low Low

0 Strain