Gene : PRP3 A. thaliana TAIR10
Primary Identifier:  ? AT3G62680 Defline:  (1 of 4) PTHR33470//PTHR33470:SF1 - FAMILY NOT NAMED // POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN
Genomic Order:  5347 Name:  ? AT3G62680
Secondary Identifier:  ? PAC:19664995
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G62680 0.5kb upstream 0.5kb upstream 1773 true Chr3: 23182222-23183994 Arabidopsis thaliana
AT3G62680 0.5kb upstream 0.5kb upstream 500 false Chr3: 23182222-23182721 Arabidopsis thaliana
AT3G62680 0.5kb downstream 0.5kb downstream 1773 true Chr3: 23182722-23184494 Arabidopsis thaliana
AT3G62680 0.5kb downstream 0.5kb downstream 500 false Chr3: 23183995-23184494 Arabidopsis thaliana
AT3G62680 1.0kb upstream 1.0kb upstream 2273 true Chr3: 23181722-23183994 Arabidopsis thaliana
AT3G62680 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23181722-23182721 Arabidopsis thaliana
AT3G62680 1.0kb downstream 1.0kb downstream 2273 true Chr3: 23182722-23184994 Arabidopsis thaliana
AT3G62680 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23183995-23184994 Arabidopsis thaliana
AT3G62680 2.0kb upstream 2.0kb upstream 3273 true Chr3: 23180722-23183994 Arabidopsis thaliana
AT3G62680 2.0kb upstream 2.0kb upstream 2000 false Chr3: 23180722-23182721 Arabidopsis thaliana
AT3G62680 2.0kb downstream 2.0kb downstream 3273 true Chr3: 23182722-23185994 Arabidopsis thaliana
AT3G62680 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23183995-23185994 Arabidopsis thaliana
AT3G62680 5.0kb upstream 5.0kb upstream 6273 true Chr3: 23177722-23183994 Arabidopsis thaliana
AT3G62680 5.0kb upstream 5.0kb upstream 5000 false Chr3: 23177722-23182721 Arabidopsis thaliana
AT3G62680 5.0kb downstream 5.0kb downstream 6273 true Chr3: 23182722-23188994 Arabidopsis thaliana
AT3G62680 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23183995-23188994 Arabidopsis thaliana
AT3G62680 10.0kb upstream 10.0kb upstream 11273 true Chr3: 23172722-23183994 Arabidopsis thaliana
AT3G62680 10.0kb upstream 10.0kb upstream 10000 false Chr3: 23172722-23182721 Arabidopsis thaliana
AT3G62680 10.0kb downstream 10.0kb downstream 11273 true Chr3: 23182722-23193994 Arabidopsis thaliana
AT3G62680 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23183995-23193994 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377113 5261 Brassicaceae View MSA
123839487 5264 Brassicales-Malvales View MSA
124322614 5266 SBM View MSA
124254675 5268 Malvidae View MSA
124065912 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low Low
cufflinks 0.838        
cufflinks 0.023     Low  
cufflinks 1.073        
cufflinks 0.018     Low  
cufflinks 2.498       High

0 Strain