Gene : AT3G62570 A. thaliana TAIR10
Defline:  (1 of 4) PTHR22904//PTHR22904:SF7 - TPR REPEAT CONTAINING PROTEIN // T14P4.7 PROTEIN Genomic Order:  5336
Name:  ? AT3G62570 Secondary Identifier:  ? PAC:19663209
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G62570 0.5kb upstream 0.5kb upstream 2625 true Chr3: 23141985-23144609 Arabidopsis thaliana
AT3G62570 0.5kb upstream 0.5kb upstream 500 false Chr3: 23141985-23142484 Arabidopsis thaliana
AT3G62570 0.5kb downstream 0.5kb downstream 2625 true Chr3: 23142485-23145109 Arabidopsis thaliana
AT3G62570 0.5kb downstream 0.5kb downstream 500 false Chr3: 23144610-23145109 Arabidopsis thaliana
AT3G62570 1.0kb upstream 1.0kb upstream 3125 true Chr3: 23141485-23144609 Arabidopsis thaliana
AT3G62570 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23141485-23142484 Arabidopsis thaliana
AT3G62570 1.0kb downstream 1.0kb downstream 3125 true Chr3: 23142485-23145609 Arabidopsis thaliana
AT3G62570 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23144610-23145609 Arabidopsis thaliana
AT3G62570 2.0kb upstream 2.0kb upstream 4125 true Chr3: 23140485-23144609 Arabidopsis thaliana
AT3G62570 2.0kb upstream 2.0kb upstream 2000 false Chr3: 23140485-23142484 Arabidopsis thaliana
AT3G62570 2.0kb downstream 2.0kb downstream 4125 true Chr3: 23142485-23146609 Arabidopsis thaliana
AT3G62570 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23144610-23146609 Arabidopsis thaliana
AT3G62570 5.0kb upstream 5.0kb upstream 7125 true Chr3: 23137485-23144609 Arabidopsis thaliana
AT3G62570 5.0kb upstream 5.0kb upstream 5000 false Chr3: 23137485-23142484 Arabidopsis thaliana
AT3G62570 5.0kb downstream 5.0kb downstream 7125 true Chr3: 23142485-23149609 Arabidopsis thaliana
AT3G62570 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23144610-23149609 Arabidopsis thaliana
AT3G62570 10.0kb upstream 10.0kb upstream 12125 true Chr3: 23132485-23144609 Arabidopsis thaliana
AT3G62570 10.0kb upstream 10.0kb upstream 10000 false Chr3: 23132485-23142484 Arabidopsis thaliana
AT3G62570 10.0kb downstream 10.0kb downstream 12125 true Chr3: 23142485-23154609 Arabidopsis thaliana
AT3G62570 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23144610-23154609 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041142 5273 Angiosperm View MSA
122370918 5261 Brassicaceae View MSA
123800067 5264 Brassicales-Malvales View MSA
124297521 5266 SBM View MSA
124249901 5268 Malvidae View MSA
124062963 5270 Rosid View MSA
123751369 5271 Pentapetalae View MSA
122797841 5272 Eudicot View MSA
121309802 5274 Embryophyte View MSA
123347457 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.16        
cufflinks 10.076        
cufflinks 0.778        
cufflinks 8.273        
cufflinks 0.744       Low
cufflinks 9.403        

0 Strain