Gene : CP12-2 A. thaliana TAIR10
Primary Identifier:  ? AT3G62410 Defline:  (1 of 2) PTHR33921//PTHR33921:SF2 - FAMILY NOT NAMED // CALVIN CYCLE PROTEIN CP12-1, CHLOROPLASTIC-RELATED
Genomic Order:  5320 Name:  ? AT3G62410
Secondary Identifier:  ? PAC:19664873
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G62410 0.5kb upstream 0.5kb upstream 1123 true Chr3: 23090444-23091566 Arabidopsis thaliana
AT3G62410 0.5kb upstream 0.5kb upstream 500 false Chr3: 23090444-23090943 Arabidopsis thaliana
AT3G62410 0.5kb downstream 0.5kb downstream 1123 true Chr3: 23090944-23092066 Arabidopsis thaliana
AT3G62410 0.5kb downstream 0.5kb downstream 500 false Chr3: 23091567-23092066 Arabidopsis thaliana
AT3G62410 1.0kb upstream 1.0kb upstream 1623 true Chr3: 23089944-23091566 Arabidopsis thaliana
AT3G62410 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23089944-23090943 Arabidopsis thaliana
AT3G62410 1.0kb downstream 1.0kb downstream 1623 true Chr3: 23090944-23092566 Arabidopsis thaliana
AT3G62410 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23091567-23092566 Arabidopsis thaliana
AT3G62410 2.0kb upstream 2.0kb upstream 2623 true Chr3: 23088944-23091566 Arabidopsis thaliana
AT3G62410 2.0kb upstream 2.0kb upstream 2000 false Chr3: 23088944-23090943 Arabidopsis thaliana
AT3G62410 2.0kb downstream 2.0kb downstream 2623 true Chr3: 23090944-23093566 Arabidopsis thaliana
AT3G62410 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23091567-23093566 Arabidopsis thaliana
AT3G62410 5.0kb upstream 5.0kb upstream 5623 true Chr3: 23085944-23091566 Arabidopsis thaliana
AT3G62410 5.0kb upstream 5.0kb upstream 5000 false Chr3: 23085944-23090943 Arabidopsis thaliana
AT3G62410 5.0kb downstream 5.0kb downstream 5623 true Chr3: 23090944-23096566 Arabidopsis thaliana
AT3G62410 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23091567-23096566 Arabidopsis thaliana
AT3G62410 10.0kb upstream 10.0kb upstream 10623 true Chr3: 23080944-23091566 Arabidopsis thaliana
AT3G62410 10.0kb upstream 10.0kb upstream 10000 false Chr3: 23080944-23090943 Arabidopsis thaliana
AT3G62410 10.0kb downstream 10.0kb downstream 10623 true Chr3: 23090944-23101566 Arabidopsis thaliana
AT3G62410 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23091567-23101566 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372519 5261 Brassicaceae View MSA
123841379 5264 Brassicales-Malvales View MSA
124347812 5266 SBM View MSA
124254040 5268 Malvidae View MSA
124070241 5270 Rosid View MSA
123742696 5271 Pentapetalae View MSA
122795504 5272 Eudicot View MSA
122046618 5273 Angiosperm View MSA
121351753 5274 Embryophyte View MSA
123424034 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 714.048     High High
cufflinks 1.263        
cufflinks 475.634     High  
cufflinks 1.381        
cufflinks 413.688     High  
cufflinks 1.144        

0 Strain