Gene : AT4G01920 A. thaliana TAIR10
Defline:  (1 of 126) PTHR32410//PTHR32410:SF152 - FAMILY NOT NAMED // C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  225
Name:  ? AT4G01920 Secondary Identifier:  ? PAC:19646267
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G01920 0.5kb upstream 0.5kb upstream 2811 true Chr4: 828890-831700 Arabidopsis thaliana
AT4G01920 0.5kb upstream 0.5kb upstream 500 false Chr4: 831201-831700 Arabidopsis thaliana
AT4G01920 0.5kb downstream 0.5kb downstream 2811 true Chr4: 828390-831200 Arabidopsis thaliana
AT4G01920 0.5kb downstream 0.5kb downstream 500 false Chr4: 828390-828889 Arabidopsis thaliana
AT4G01920 1.0kb upstream 1.0kb upstream 3311 true Chr4: 828890-832200 Arabidopsis thaliana
AT4G01920 1.0kb upstream 1.0kb upstream 1000 false Chr4: 831201-832200 Arabidopsis thaliana
AT4G01920 1.0kb downstream 1.0kb downstream 3311 true Chr4: 827890-831200 Arabidopsis thaliana
AT4G01920 1.0kb downstream 1.0kb downstream 1000 false Chr4: 827890-828889 Arabidopsis thaliana
AT4G01920 2.0kb upstream 2.0kb upstream 4311 true Chr4: 828890-833200 Arabidopsis thaliana
AT4G01920 2.0kb upstream 2.0kb upstream 2000 false Chr4: 831201-833200 Arabidopsis thaliana
AT4G01920 2.0kb downstream 2.0kb downstream 4311 true Chr4: 826890-831200 Arabidopsis thaliana
AT4G01920 2.0kb downstream 2.0kb downstream 2000 false Chr4: 826890-828889 Arabidopsis thaliana
AT4G01920 5.0kb upstream 5.0kb upstream 7311 true Chr4: 828890-836200 Arabidopsis thaliana
AT4G01920 5.0kb upstream 5.0kb upstream 5000 false Chr4: 831201-836200 Arabidopsis thaliana
AT4G01920 5.0kb downstream 5.0kb downstream 7311 true Chr4: 823890-831200 Arabidopsis thaliana
AT4G01920 5.0kb downstream 5.0kb downstream 5000 false Chr4: 823890-828889 Arabidopsis thaliana
AT4G01920 10.0kb upstream 10.0kb upstream 12311 true Chr4: 828890-841200 Arabidopsis thaliana
AT4G01920 10.0kb upstream 10.0kb upstream 10000 false Chr4: 831201-841200 Arabidopsis thaliana
AT4G01920 10.0kb downstream 10.0kb downstream 12311 true Chr4: 818890-831200 Arabidopsis thaliana
AT4G01920 10.0kb downstream 10.0kb downstream 10000 false Chr4: 818890-828889 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378889 5261 Brassicaceae View MSA
123841170 5264 Brassicales-Malvales View MSA
124322862 5266 SBM View MSA
124254358 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.447        
cufflinks 3.355        
cufflinks 1.819       Low
cufflinks 4.407        
cufflinks 2.035       Low
cufflinks 4.854       High

0 Strain