Gene : AT4G01580 A. thaliana TAIR10
Defline:  (1 of 92) PF02362 - B3 DNA binding domain (B3) Genomic Order:  184
Name:  ? AT4G01580 Secondary Identifier:  ? PAC:19644131
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G01580 0.5kb upstream 0.5kb upstream 1582 true Chr4: 685246-686827 Arabidopsis thaliana
AT4G01580 0.5kb upstream 0.5kb upstream 500 false Chr4: 685246-685745 Arabidopsis thaliana
AT4G01580 0.5kb downstream 0.5kb downstream 1582 true Chr4: 685746-687327 Arabidopsis thaliana
AT4G01580 0.5kb downstream 0.5kb downstream 500 false Chr4: 686828-687327 Arabidopsis thaliana
AT4G01580 1.0kb upstream 1.0kb upstream 2082 true Chr4: 684746-686827 Arabidopsis thaliana
AT4G01580 1.0kb upstream 1.0kb upstream 1000 false Chr4: 684746-685745 Arabidopsis thaliana
AT4G01580 1.0kb downstream 1.0kb downstream 2082 true Chr4: 685746-687827 Arabidopsis thaliana
AT4G01580 1.0kb downstream 1.0kb downstream 1000 false Chr4: 686828-687827 Arabidopsis thaliana
AT4G01580 2.0kb upstream 2.0kb upstream 3082 true Chr4: 683746-686827 Arabidopsis thaliana
AT4G01580 2.0kb upstream 2.0kb upstream 2000 false Chr4: 683746-685745 Arabidopsis thaliana
AT4G01580 2.0kb downstream 2.0kb downstream 3082 true Chr4: 685746-688827 Arabidopsis thaliana
AT4G01580 2.0kb downstream 2.0kb downstream 2000 false Chr4: 686828-688827 Arabidopsis thaliana
AT4G01580 5.0kb upstream 5.0kb upstream 6082 true Chr4: 680746-686827 Arabidopsis thaliana
AT4G01580 5.0kb upstream 5.0kb upstream 5000 false Chr4: 680746-685745 Arabidopsis thaliana
AT4G01580 5.0kb downstream 5.0kb downstream 6082 true Chr4: 685746-691827 Arabidopsis thaliana
AT4G01580 5.0kb downstream 5.0kb downstream 5000 false Chr4: 686828-691827 Arabidopsis thaliana
AT4G01580 10.0kb upstream 10.0kb upstream 11082 true Chr4: 675746-686827 Arabidopsis thaliana
AT4G01580 10.0kb upstream 10.0kb upstream 10000 false Chr4: 675746-685745 Arabidopsis thaliana
AT4G01580 10.0kb downstream 10.0kb downstream 11082 true Chr4: 685746-696827 Arabidopsis thaliana
AT4G01580 10.0kb downstream 10.0kb downstream 10000 false Chr4: 686828-696827 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330383 5261 Brassicaceae Singleton cluster - no MSA
123771631 5264 Brassicales-Malvales Singleton cluster - no MSA
124270159 5266 SBM Singleton cluster - no MSA
124126253 5268 Malvidae Singleton cluster - no MSA
123855177 5270 Rosid Singleton cluster - no MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.795        
cufflinks 6.028        
cufflinks 4.259        
cufflinks 3.798        
cufflinks 2.55       Low
cufflinks 7.42       High

0 Strain