Gene : AT4G01280 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12802//PTHR12802:SF49 - SWI/SNF COMPLEX-RELATED // PROTEIN REVEILLE 3-RELATED Genomic Order:  152
Name:  ? AT4G01280 Secondary Identifier:  ? PAC:19645029
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G01280 0.5kb upstream 0.5kb upstream 2612 true Chr4: 534711-537322 Arabidopsis thaliana
AT4G01280 0.5kb upstream 0.5kb upstream 500 false Chr4: 534711-535210 Arabidopsis thaliana
AT4G01280 0.5kb downstream 0.5kb downstream 2612 true Chr4: 535211-537822 Arabidopsis thaliana
AT4G01280 0.5kb downstream 0.5kb downstream 500 false Chr4: 537323-537822 Arabidopsis thaliana
AT4G01280 1.0kb upstream 1.0kb upstream 3112 true Chr4: 534211-537322 Arabidopsis thaliana
AT4G01280 1.0kb upstream 1.0kb upstream 1000 false Chr4: 534211-535210 Arabidopsis thaliana
AT4G01280 1.0kb downstream 1.0kb downstream 3112 true Chr4: 535211-538322 Arabidopsis thaliana
AT4G01280 1.0kb downstream 1.0kb downstream 1000 false Chr4: 537323-538322 Arabidopsis thaliana
AT4G01280 2.0kb upstream 2.0kb upstream 4112 true Chr4: 533211-537322 Arabidopsis thaliana
AT4G01280 2.0kb upstream 2.0kb upstream 2000 false Chr4: 533211-535210 Arabidopsis thaliana
AT4G01280 2.0kb downstream 2.0kb downstream 4112 true Chr4: 535211-539322 Arabidopsis thaliana
AT4G01280 2.0kb downstream 2.0kb downstream 2000 false Chr4: 537323-539322 Arabidopsis thaliana
AT4G01280 5.0kb upstream 5.0kb upstream 7112 true Chr4: 530211-537322 Arabidopsis thaliana
AT4G01280 5.0kb upstream 5.0kb upstream 5000 false Chr4: 530211-535210 Arabidopsis thaliana
AT4G01280 5.0kb downstream 5.0kb downstream 7112 true Chr4: 535211-542322 Arabidopsis thaliana
AT4G01280 5.0kb downstream 5.0kb downstream 5000 false Chr4: 537323-542322 Arabidopsis thaliana
AT4G01280 10.0kb upstream 10.0kb upstream 12112 true Chr4: 525211-537322 Arabidopsis thaliana
AT4G01280 10.0kb upstream 10.0kb upstream 10000 false Chr4: 525211-535210 Arabidopsis thaliana
AT4G01280 10.0kb downstream 10.0kb downstream 12112 true Chr4: 535211-547322 Arabidopsis thaliana
AT4G01280 10.0kb downstream 10.0kb downstream 10000 false Chr4: 537323-547322 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363971 5261 Brassicaceae View MSA
123798658 5264 Brassicales-Malvales View MSA
124296266 5266 SBM View MSA
124148471 5268 Malvidae View MSA
124069739 5270 Rosid View MSA
123747099 5271 Pentapetalae View MSA
122797418 5272 Eudicot View MSA
122043190 5273 Angiosperm View MSA
121350765 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.45        
cufflinks 5.068        
cufflinks 2.687       Low
cufflinks 5.78       High
cufflinks 3.002        
cufflinks 4.2        

0 Strain