Gene : AT4G03460 A. thaliana TAIR10
Defline:  (1 of 11) PTHR24177//PTHR24177:SF52 - FAMILY NOT NAMED // ANKYRIN REPEAT FAMILY PROTEIN-RELATED Genomic Order:  402
Name:  ? AT4G03460 Secondary Identifier:  ? PAC:19645397
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G03460 0.5kb upstream 0.5kb upstream 4208 true Chr4: 1536404-1540611 Arabidopsis thaliana
AT4G03460 0.5kb upstream 0.5kb upstream 500 false Chr4: 1540112-1540611 Arabidopsis thaliana
AT4G03460 0.5kb downstream 0.5kb downstream 4208 true Chr4: 1535904-1540111 Arabidopsis thaliana
AT4G03460 0.5kb downstream 0.5kb downstream 500 false Chr4: 1535904-1536403 Arabidopsis thaliana
AT4G03460 1.0kb upstream 1.0kb upstream 4708 true Chr4: 1536404-1541111 Arabidopsis thaliana
AT4G03460 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1540112-1541111 Arabidopsis thaliana
AT4G03460 1.0kb downstream 1.0kb downstream 4708 true Chr4: 1535404-1540111 Arabidopsis thaliana
AT4G03460 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1535404-1536403 Arabidopsis thaliana
AT4G03460 2.0kb upstream 2.0kb upstream 5708 true Chr4: 1536404-1542111 Arabidopsis thaliana
AT4G03460 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1540112-1542111 Arabidopsis thaliana
AT4G03460 2.0kb downstream 2.0kb downstream 5708 true Chr4: 1534404-1540111 Arabidopsis thaliana
AT4G03460 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1534404-1536403 Arabidopsis thaliana
AT4G03460 5.0kb upstream 5.0kb upstream 8708 true Chr4: 1536404-1545111 Arabidopsis thaliana
AT4G03460 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1540112-1545111 Arabidopsis thaliana
AT4G03460 5.0kb downstream 5.0kb downstream 8708 true Chr4: 1531404-1540111 Arabidopsis thaliana
AT4G03460 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1531404-1536403 Arabidopsis thaliana
AT4G03460 10.0kb upstream 10.0kb upstream 13708 true Chr4: 1536404-1550111 Arabidopsis thaliana
AT4G03460 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1540112-1550111 Arabidopsis thaliana
AT4G03460 10.0kb downstream 10.0kb downstream 13708 true Chr4: 1526404-1540111 Arabidopsis thaliana
AT4G03460 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1526404-1536403 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330503 5261 Brassicaceae Singleton cluster - no MSA
123839000 5264 Brassicales-Malvales View MSA
124351539 5266 SBM View MSA
124254584 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.03     Low  
cufflinks 0.098     Low High
cufflinks 0.041     Low  
cufflinks 0.04     Low  
cufflinks 0.017     Low Low
cufflinks 0.113     Low High

0 Strain