Gene : SRF3 A. thaliana TAIR10
Primary Identifier:  ? AT4G03390 Defline:  (1 of 3) PTHR27001//PTHR27001:SF91 - FAMILY NOT NAMED // PROTEIN STRUBBELIG-RELATED
Genomic Order:  393 Name:  ? AT4G03390
Secondary Identifier:  ? PAC:19647073
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G03390 0.5kb upstream 0.5kb upstream 5139 true Chr4: 1490465-1495603 Arabidopsis thaliana
AT4G03390 0.5kb upstream 0.5kb upstream 500 false Chr4: 1495104-1495603 Arabidopsis thaliana
AT4G03390 0.5kb downstream 0.5kb downstream 5139 true Chr4: 1489965-1495103 Arabidopsis thaliana
AT4G03390 0.5kb downstream 0.5kb downstream 500 false Chr4: 1489965-1490464 Arabidopsis thaliana
AT4G03390 1.0kb upstream 1.0kb upstream 5639 true Chr4: 1490465-1496103 Arabidopsis thaliana
AT4G03390 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1495104-1496103 Arabidopsis thaliana
AT4G03390 1.0kb downstream 1.0kb downstream 5639 true Chr4: 1489465-1495103 Arabidopsis thaliana
AT4G03390 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1489465-1490464 Arabidopsis thaliana
AT4G03390 2.0kb upstream 2.0kb upstream 6639 true Chr4: 1490465-1497103 Arabidopsis thaliana
AT4G03390 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1495104-1497103 Arabidopsis thaliana
AT4G03390 2.0kb downstream 2.0kb downstream 6639 true Chr4: 1488465-1495103 Arabidopsis thaliana
AT4G03390 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1488465-1490464 Arabidopsis thaliana
AT4G03390 5.0kb upstream 5.0kb upstream 9639 true Chr4: 1490465-1500103 Arabidopsis thaliana
AT4G03390 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1495104-1500103 Arabidopsis thaliana
AT4G03390 5.0kb downstream 5.0kb downstream 9639 true Chr4: 1485465-1495103 Arabidopsis thaliana
AT4G03390 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1485465-1490464 Arabidopsis thaliana
AT4G03390 10.0kb upstream 10.0kb upstream 14639 true Chr4: 1490465-1505103 Arabidopsis thaliana
AT4G03390 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1495104-1505103 Arabidopsis thaliana
AT4G03390 10.0kb downstream 10.0kb downstream 14639 true Chr4: 1480465-1495103 Arabidopsis thaliana
AT4G03390 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1480465-1490464 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377031 5261 Brassicaceae View MSA
123841080 5264 Brassicales-Malvales View MSA
124348588 5266 SBM View MSA
124250253 5268 Malvidae View MSA
124064785 5270 Rosid View MSA
123746187 5271 Pentapetalae View MSA
122786537 5272 Eudicot View MSA
122051467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348233 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.602        
cufflinks 14.89        
cufflinks 8.289       Low
cufflinks 21.324       High
cufflinks 10.063        
cufflinks 20.776       High

0 Strain