Gene : AT4G02180 A. thaliana TAIR10
Defline:  (1 of 6) 1.17.1.4 - Xanthine dehydrogenase / Xanthine/NAD(+) oxidoreductase Genomic Order:  255
Name:  ? AT4G02180 Secondary Identifier:  ? PAC:19646935
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5695 Arabidopsis thaliana pathologic  
Athaliana PWY-6596 Arabidopsis thaliana pathologic  
Athaliana PWY-6606 Arabidopsis thaliana pathologic  
Athaliana PWY-6608 Arabidopsis thaliana pathologic  
Athaliana SALVADEHYPOX-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G02180 0.5kb upstream 0.5kb upstream 4054 true Chr4: 959464-963517 Arabidopsis thaliana
AT4G02180 0.5kb upstream 0.5kb upstream 500 false Chr4: 959464-959963 Arabidopsis thaliana
AT4G02180 0.5kb downstream 0.5kb downstream 4054 true Chr4: 959964-964017 Arabidopsis thaliana
AT4G02180 0.5kb downstream 0.5kb downstream 500 false Chr4: 963518-964017 Arabidopsis thaliana
AT4G02180 1.0kb upstream 1.0kb upstream 4554 true Chr4: 958964-963517 Arabidopsis thaliana
AT4G02180 1.0kb upstream 1.0kb upstream 1000 false Chr4: 958964-959963 Arabidopsis thaliana
AT4G02180 1.0kb downstream 1.0kb downstream 4554 true Chr4: 959964-964517 Arabidopsis thaliana
AT4G02180 1.0kb downstream 1.0kb downstream 1000 false Chr4: 963518-964517 Arabidopsis thaliana
AT4G02180 2.0kb upstream 2.0kb upstream 5554 true Chr4: 957964-963517 Arabidopsis thaliana
AT4G02180 2.0kb upstream 2.0kb upstream 2000 false Chr4: 957964-959963 Arabidopsis thaliana
AT4G02180 2.0kb downstream 2.0kb downstream 5554 true Chr4: 959964-965517 Arabidopsis thaliana
AT4G02180 2.0kb downstream 2.0kb downstream 2000 false Chr4: 963518-965517 Arabidopsis thaliana
AT4G02180 5.0kb upstream 5.0kb upstream 8554 true Chr4: 954964-963517 Arabidopsis thaliana
AT4G02180 5.0kb upstream 5.0kb upstream 5000 false Chr4: 954964-959963 Arabidopsis thaliana
AT4G02180 5.0kb downstream 5.0kb downstream 8554 true Chr4: 959964-968517 Arabidopsis thaliana
AT4G02180 5.0kb downstream 5.0kb downstream 5000 false Chr4: 963518-968517 Arabidopsis thaliana
AT4G02180 10.0kb upstream 10.0kb upstream 13554 true Chr4: 949964-963517 Arabidopsis thaliana
AT4G02180 10.0kb upstream 10.0kb upstream 10000 false Chr4: 949964-959963 Arabidopsis thaliana
AT4G02180 10.0kb downstream 10.0kb downstream 13554 true Chr4: 959964-973517 Arabidopsis thaliana
AT4G02180 10.0kb downstream 10.0kb downstream 10000 false Chr4: 963518-973517 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343556 5261 Brassicaceae View MSA
123837512 5264 Brassicales-Malvales View MSA
124322320 5266 SBM View MSA
124254358 5268 Malvidae View MSA
124070692 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.039     Low  
cufflinks 0.943        
cufflinks 0.012     Low Low
cufflinks 1.077        
cufflinks 0.032     Low  
cufflinks 2.112       High

0 Strain