Gene : AT4G08160 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31490:SF1 - F19C14.2 PROTEIN-RELATED Genomic Order:  630
Name:  ? AT4G08160 Secondary Identifier:  ? PAC:19644304
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G08160 0.5kb upstream 0.5kb upstream 4241 true Chr4: 5159034-5163274 Arabidopsis thaliana
AT4G08160 0.5kb upstream 0.5kb upstream 500 false Chr4: 5162775-5163274 Arabidopsis thaliana
AT4G08160 0.5kb downstream 0.5kb downstream 4241 true Chr4: 5158534-5162774 Arabidopsis thaliana
AT4G08160 0.5kb downstream 0.5kb downstream 500 false Chr4: 5158534-5159033 Arabidopsis thaliana
AT4G08160 1.0kb upstream 1.0kb upstream 4741 true Chr4: 5159034-5163774 Arabidopsis thaliana
AT4G08160 1.0kb upstream 1.0kb upstream 1000 false Chr4: 5162775-5163774 Arabidopsis thaliana
AT4G08160 1.0kb downstream 1.0kb downstream 4741 true Chr4: 5158034-5162774 Arabidopsis thaliana
AT4G08160 1.0kb downstream 1.0kb downstream 1000 false Chr4: 5158034-5159033 Arabidopsis thaliana
AT4G08160 2.0kb upstream 2.0kb upstream 5741 true Chr4: 5159034-5164774 Arabidopsis thaliana
AT4G08160 2.0kb upstream 2.0kb upstream 2000 false Chr4: 5162775-5164774 Arabidopsis thaliana
AT4G08160 2.0kb downstream 2.0kb downstream 5741 true Chr4: 5157034-5162774 Arabidopsis thaliana
AT4G08160 2.0kb downstream 2.0kb downstream 2000 false Chr4: 5157034-5159033 Arabidopsis thaliana
AT4G08160 5.0kb upstream 5.0kb upstream 8741 true Chr4: 5159034-5167774 Arabidopsis thaliana
AT4G08160 5.0kb upstream 5.0kb upstream 5000 false Chr4: 5162775-5167774 Arabidopsis thaliana
AT4G08160 5.0kb downstream 5.0kb downstream 8741 true Chr4: 5154034-5162774 Arabidopsis thaliana
AT4G08160 5.0kb downstream 5.0kb downstream 5000 false Chr4: 5154034-5159033 Arabidopsis thaliana
AT4G08160 10.0kb upstream 10.0kb upstream 13741 true Chr4: 5159034-5172774 Arabidopsis thaliana
AT4G08160 10.0kb upstream 10.0kb upstream 10000 false Chr4: 5162775-5172774 Arabidopsis thaliana
AT4G08160 10.0kb downstream 10.0kb downstream 13741 true Chr4: 5149034-5162774 Arabidopsis thaliana
AT4G08160 10.0kb downstream 10.0kb downstream 10000 false Chr4: 5149034-5159033 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364513 5261 Brassicaceae View MSA
123798767 5264 Brassicales-Malvales View MSA
124296362 5266 SBM View MSA
124253078 5268 Malvidae View MSA
124066828 5270 Rosid View MSA
123742236 5271 Pentapetalae View MSA
122786340 5272 Eudicot View MSA
122047511 5273 Angiosperm View MSA
121347321 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.461        
cufflinks 2.579        
cufflinks 0.399        
cufflinks 4.311        
cufflinks 0.303       Low
cufflinks 5.537       High

0 Strain