Gene : EHD2 A. thaliana TAIR10
Primary Identifier:  ? AT4G05520 Defline:  (1 of 1) PTHR11216//PTHR11216:SF76 - EH DOMAIN // SUBFAMILY NOT NAMED
Genomic Order:  572 Name:  ? AT4G05520
Secondary Identifier:  ? PAC:19648793
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G05520 0.5kb upstream 0.5kb upstream 3979 true Chr4: 2803951-2807929 Arabidopsis thaliana
AT4G05520 0.5kb upstream 0.5kb upstream 500 false Chr4: 2803951-2804450 Arabidopsis thaliana
AT4G05520 0.5kb downstream 0.5kb downstream 3979 true Chr4: 2804451-2808429 Arabidopsis thaliana
AT4G05520 0.5kb downstream 0.5kb downstream 500 false Chr4: 2807930-2808429 Arabidopsis thaliana
AT4G05520 1.0kb upstream 1.0kb upstream 4479 true Chr4: 2803451-2807929 Arabidopsis thaliana
AT4G05520 1.0kb upstream 1.0kb upstream 1000 false Chr4: 2803451-2804450 Arabidopsis thaliana
AT4G05520 1.0kb downstream 1.0kb downstream 4479 true Chr4: 2804451-2808929 Arabidopsis thaliana
AT4G05520 1.0kb downstream 1.0kb downstream 1000 false Chr4: 2807930-2808929 Arabidopsis thaliana
AT4G05520 2.0kb upstream 2.0kb upstream 5479 true Chr4: 2802451-2807929 Arabidopsis thaliana
AT4G05520 2.0kb upstream 2.0kb upstream 2000 false Chr4: 2802451-2804450 Arabidopsis thaliana
AT4G05520 2.0kb downstream 2.0kb downstream 5479 true Chr4: 2804451-2809929 Arabidopsis thaliana
AT4G05520 2.0kb downstream 2.0kb downstream 2000 false Chr4: 2807930-2809929 Arabidopsis thaliana
AT4G05520 5.0kb upstream 5.0kb upstream 8479 true Chr4: 2799451-2807929 Arabidopsis thaliana
AT4G05520 5.0kb upstream 5.0kb upstream 5000 false Chr4: 2799451-2804450 Arabidopsis thaliana
AT4G05520 5.0kb downstream 5.0kb downstream 8479 true Chr4: 2804451-2812929 Arabidopsis thaliana
AT4G05520 5.0kb downstream 5.0kb downstream 5000 false Chr4: 2807930-2812929 Arabidopsis thaliana
AT4G05520 10.0kb upstream 10.0kb upstream 13479 true Chr4: 2794451-2807929 Arabidopsis thaliana
AT4G05520 10.0kb upstream 10.0kb upstream 10000 false Chr4: 2794451-2804450 Arabidopsis thaliana
AT4G05520 10.0kb downstream 10.0kb downstream 13479 true Chr4: 2804451-2817929 Arabidopsis thaliana
AT4G05520 10.0kb downstream 10.0kb downstream 10000 false Chr4: 2807930-2817929 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365501 5261 Brassicaceae View MSA
123828654 5264 Brassicales-Malvales View MSA
124341672 5266 SBM View MSA
124245666 5268 Malvidae View MSA
124069320 5270 Rosid View MSA
123743696 5271 Pentapetalae View MSA
122797625 5272 Eudicot View MSA
122047763 5273 Angiosperm View MSA
123428944 5275 Viridiplantae View MSA
121344712 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.562        
cufflinks 3.499        
cufflinks 1.137        
cufflinks 3.26        
cufflinks 0.941       Low
cufflinks 4.839       High

0 Strain