Gene : UBQ10 A. thaliana TAIR10
Primary Identifier:  ? AT4G05320 Defline:  (1 of 1) PTHR10666//PTHR10666:SF150//PTHR10666:SF155 - UBIQUITIN // POLYUBIQUITIN 3 // POLYUBIQUITIN 4
Genomic Order:  552 Name:  ? AT4G05320
Secondary Identifier:  ? PAC:19645959
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G05320 0.5kb upstream 0.5kb upstream 2639 true Chr4: 2717670-2720308 Arabidopsis thaliana
AT4G05320 0.5kb upstream 0.5kb upstream 500 false Chr4: 2717670-2718169 Arabidopsis thaliana
AT4G05320 0.5kb downstream 0.5kb downstream 2639 true Chr4: 2718170-2720808 Arabidopsis thaliana
AT4G05320 0.5kb downstream 0.5kb downstream 500 false Chr4: 2720309-2720808 Arabidopsis thaliana
AT4G05320 1.0kb upstream 1.0kb upstream 3139 true Chr4: 2717170-2720308 Arabidopsis thaliana
AT4G05320 1.0kb upstream 1.0kb upstream 1000 false Chr4: 2717170-2718169 Arabidopsis thaliana
AT4G05320 1.0kb downstream 1.0kb downstream 3139 true Chr4: 2718170-2721308 Arabidopsis thaliana
AT4G05320 1.0kb downstream 1.0kb downstream 1000 false Chr4: 2720309-2721308 Arabidopsis thaliana
AT4G05320 2.0kb upstream 2.0kb upstream 4139 true Chr4: 2716170-2720308 Arabidopsis thaliana
AT4G05320 2.0kb upstream 2.0kb upstream 2000 false Chr4: 2716170-2718169 Arabidopsis thaliana
AT4G05320 2.0kb downstream 2.0kb downstream 4139 true Chr4: 2718170-2722308 Arabidopsis thaliana
AT4G05320 2.0kb downstream 2.0kb downstream 2000 false Chr4: 2720309-2722308 Arabidopsis thaliana
AT4G05320 5.0kb upstream 5.0kb upstream 7139 true Chr4: 2713170-2720308 Arabidopsis thaliana
AT4G05320 5.0kb upstream 5.0kb upstream 5000 false Chr4: 2713170-2718169 Arabidopsis thaliana
AT4G05320 5.0kb downstream 5.0kb downstream 7139 true Chr4: 2718170-2725308 Arabidopsis thaliana
AT4G05320 5.0kb downstream 5.0kb downstream 5000 false Chr4: 2720309-2725308 Arabidopsis thaliana
AT4G05320 10.0kb upstream 10.0kb upstream 12139 true Chr4: 2708170-2720308 Arabidopsis thaliana
AT4G05320 10.0kb upstream 10.0kb upstream 10000 false Chr4: 2708170-2718169 Arabidopsis thaliana
AT4G05320 10.0kb downstream 10.0kb downstream 12139 true Chr4: 2718170-2730308 Arabidopsis thaliana
AT4G05320 10.0kb downstream 10.0kb downstream 10000 false Chr4: 2720309-2730308 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
124071531 5270 Rosid View MSA
122376007 5261 Brassicaceae View MSA
123841361 5264 Brassicales-Malvales View MSA
124346867 5266 SBM View MSA
124252637 5268 Malvidae View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 117.298     High  
cufflinks 79.102     High  
cufflinks 80.885     High  
cufflinks 108.824     High  
cufflinks 126.159     High High
cufflinks 73.063     High Low

0 Strain