Gene : AGD13 A. thaliana TAIR10
Primary Identifier:  ? AT4G05330 Defline:  (1 of 2) PTHR23180:SF245 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12-RELATED
Genomic Order:  553 Name:  ? AT4G05330
Secondary Identifier:  ? PAC:19646940
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G05330 0.5kb upstream 0.5kb upstream 3065 true Chr4: 2720561-2723625 Arabidopsis thaliana
AT4G05330 0.5kb upstream 0.5kb upstream 500 false Chr4: 2723126-2723625 Arabidopsis thaliana
AT4G05330 0.5kb downstream 0.5kb downstream 3065 true Chr4: 2720061-2723125 Arabidopsis thaliana
AT4G05330 0.5kb downstream 0.5kb downstream 500 false Chr4: 2720061-2720560 Arabidopsis thaliana
AT4G05330 1.0kb upstream 1.0kb upstream 3565 true Chr4: 2720561-2724125 Arabidopsis thaliana
AT4G05330 1.0kb upstream 1.0kb upstream 1000 false Chr4: 2723126-2724125 Arabidopsis thaliana
AT4G05330 1.0kb downstream 1.0kb downstream 3565 true Chr4: 2719561-2723125 Arabidopsis thaliana
AT4G05330 1.0kb downstream 1.0kb downstream 1000 false Chr4: 2719561-2720560 Arabidopsis thaliana
AT4G05330 2.0kb upstream 2.0kb upstream 4565 true Chr4: 2720561-2725125 Arabidopsis thaliana
AT4G05330 2.0kb upstream 2.0kb upstream 2000 false Chr4: 2723126-2725125 Arabidopsis thaliana
AT4G05330 2.0kb downstream 2.0kb downstream 4565 true Chr4: 2718561-2723125 Arabidopsis thaliana
AT4G05330 2.0kb downstream 2.0kb downstream 2000 false Chr4: 2718561-2720560 Arabidopsis thaliana
AT4G05330 5.0kb upstream 5.0kb upstream 7565 true Chr4: 2720561-2728125 Arabidopsis thaliana
AT4G05330 5.0kb upstream 5.0kb upstream 5000 false Chr4: 2723126-2728125 Arabidopsis thaliana
AT4G05330 5.0kb downstream 5.0kb downstream 7565 true Chr4: 2715561-2723125 Arabidopsis thaliana
AT4G05330 5.0kb downstream 5.0kb downstream 5000 false Chr4: 2715561-2720560 Arabidopsis thaliana
AT4G05330 10.0kb upstream 10.0kb upstream 12565 true Chr4: 2720561-2733125 Arabidopsis thaliana
AT4G05330 10.0kb upstream 10.0kb upstream 10000 false Chr4: 2723126-2733125 Arabidopsis thaliana
AT4G05330 10.0kb downstream 10.0kb downstream 12565 true Chr4: 2710561-2723125 Arabidopsis thaliana
AT4G05330 10.0kb downstream 10.0kb downstream 10000 false Chr4: 2710561-2720560 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368466 5261 Brassicaceae View MSA
123838163 5264 Brassicales-Malvales View MSA
124346458 5266 SBM View MSA
124242974 5268 Malvidae View MSA
124061830 5270 Rosid View MSA
123748572 5271 Pentapetalae View MSA
122790257 5272 Eudicot View MSA
122045415 5273 Angiosperm View MSA
121349513 5274 Embryophyte View MSA
123381340 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.064        
cufflinks 5.084        
cufflinks 9.086        
cufflinks 4.483       Low
cufflinks 9.671       High
cufflinks 4.608        

0 Strain