Gene : AT4G04940 A. thaliana TAIR10
Defline:  (1 of 1) K14554 - U3 small nucleolar RNA-associated protein 21 (UTP21, WDR36) Genomic Order:  506
Name:  ? AT4G04940 Secondary Identifier:  ? PAC:19645736
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G04940 0.5kb upstream 0.5kb upstream 6666 true Chr4: 2511028-2517693 Arabidopsis thaliana
AT4G04940 0.5kb upstream 0.5kb upstream 500 false Chr4: 2517194-2517693 Arabidopsis thaliana
AT4G04940 0.5kb downstream 0.5kb downstream 6666 true Chr4: 2510528-2517193 Arabidopsis thaliana
AT4G04940 0.5kb downstream 0.5kb downstream 500 false Chr4: 2510528-2511027 Arabidopsis thaliana
AT4G04940 1.0kb upstream 1.0kb upstream 7166 true Chr4: 2511028-2518193 Arabidopsis thaliana
AT4G04940 1.0kb upstream 1.0kb upstream 1000 false Chr4: 2517194-2518193 Arabidopsis thaliana
AT4G04940 1.0kb downstream 1.0kb downstream 7166 true Chr4: 2510028-2517193 Arabidopsis thaliana
AT4G04940 1.0kb downstream 1.0kb downstream 1000 false Chr4: 2510028-2511027 Arabidopsis thaliana
AT4G04940 2.0kb upstream 2.0kb upstream 8166 true Chr4: 2511028-2519193 Arabidopsis thaliana
AT4G04940 2.0kb upstream 2.0kb upstream 2000 false Chr4: 2517194-2519193 Arabidopsis thaliana
AT4G04940 2.0kb downstream 2.0kb downstream 8166 true Chr4: 2509028-2517193 Arabidopsis thaliana
AT4G04940 2.0kb downstream 2.0kb downstream 2000 false Chr4: 2509028-2511027 Arabidopsis thaliana
AT4G04940 5.0kb upstream 5.0kb upstream 11166 true Chr4: 2511028-2522193 Arabidopsis thaliana
AT4G04940 5.0kb upstream 5.0kb upstream 5000 false Chr4: 2517194-2522193 Arabidopsis thaliana
AT4G04940 5.0kb downstream 5.0kb downstream 11166 true Chr4: 2506028-2517193 Arabidopsis thaliana
AT4G04940 5.0kb downstream 5.0kb downstream 5000 false Chr4: 2506028-2511027 Arabidopsis thaliana
AT4G04940 10.0kb upstream 10.0kb upstream 16166 true Chr4: 2511028-2527193 Arabidopsis thaliana
AT4G04940 10.0kb upstream 10.0kb upstream 10000 false Chr4: 2517194-2527193 Arabidopsis thaliana
AT4G04940 10.0kb downstream 10.0kb downstream 16166 true Chr4: 2501028-2517193 Arabidopsis thaliana
AT4G04940 10.0kb downstream 10.0kb downstream 10000 false Chr4: 2501028-2511027 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362805 5261 Brassicaceae View MSA
123828021 5264 Brassicales-Malvales View MSA
124341212 5266 SBM View MSA
124241729 5268 Malvidae View MSA
124065336 5270 Rosid View MSA
123738219 5271 Pentapetalae View MSA
122786158 5272 Eudicot View MSA
122041805 5273 Angiosperm View MSA
121346831 5274 Embryophyte View MSA
123424252 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.654        
cufflinks 3.343        
cufflinks 1.603        
cufflinks 3.669        
cufflinks 1.088       Low
cufflinks 4.888       High

0 Strain