Gene : AT4G04770 A. thaliana TAIR10

Defline:  (1 of 1) K07033 - uncharacterized protein (K07033) Genomic Order:  487
Name:  ? AT4G04770 Secondary Identifier:  ? PAC:19643919

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G04770 0.5kb upstream 0.5kb upstream 2552 true Chr4: 2427799-2430350 Arabidopsis thaliana
AT4G04770 0.5kb upstream 0.5kb upstream 500 false Chr4: 2429851-2430350 Arabidopsis thaliana
AT4G04770 0.5kb downstream 0.5kb downstream 2552 true Chr4: 2427299-2429850 Arabidopsis thaliana
AT4G04770 0.5kb downstream 0.5kb downstream 500 false Chr4: 2427299-2427798 Arabidopsis thaliana
AT4G04770 1.0kb upstream 1.0kb upstream 3052 true Chr4: 2427799-2430850 Arabidopsis thaliana
AT4G04770 1.0kb upstream 1.0kb upstream 1000 false Chr4: 2429851-2430850 Arabidopsis thaliana
AT4G04770 1.0kb downstream 1.0kb downstream 3052 true Chr4: 2426799-2429850 Arabidopsis thaliana
AT4G04770 1.0kb downstream 1.0kb downstream 1000 false Chr4: 2426799-2427798 Arabidopsis thaliana
AT4G04770 2.0kb upstream 2.0kb upstream 4052 true Chr4: 2427799-2431850 Arabidopsis thaliana
AT4G04770 2.0kb upstream 2.0kb upstream 2000 false Chr4: 2429851-2431850 Arabidopsis thaliana
AT4G04770 2.0kb downstream 2.0kb downstream 4052 true Chr4: 2425799-2429850 Arabidopsis thaliana
AT4G04770 2.0kb downstream 2.0kb downstream 2000 false Chr4: 2425799-2427798 Arabidopsis thaliana
AT4G04770 5.0kb upstream 5.0kb upstream 7052 true Chr4: 2427799-2434850 Arabidopsis thaliana
AT4G04770 5.0kb upstream 5.0kb upstream 5000 false Chr4: 2429851-2434850 Arabidopsis thaliana
AT4G04770 5.0kb downstream 5.0kb downstream 7052 true Chr4: 2422799-2429850 Arabidopsis thaliana
AT4G04770 5.0kb downstream 5.0kb downstream 5000 false Chr4: 2422799-2427798 Arabidopsis thaliana
AT4G04770 10.0kb upstream 10.0kb upstream 12052 true Chr4: 2427799-2439850 Arabidopsis thaliana
AT4G04770 10.0kb upstream 10.0kb upstream 10000 false Chr4: 2429851-2439850 Arabidopsis thaliana
AT4G04770 10.0kb downstream 10.0kb downstream 12052 true Chr4: 2417799-2429850 Arabidopsis thaliana
AT4G04770 10.0kb downstream 10.0kb downstream 10000 false Chr4: 2417799-2427798 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370793 5261 Brassicaceae View MSA
123832669 5264 Brassicales-Malvales View MSA
124340855 5266 SBM View MSA
124241933 5268 Malvidae View MSA
124060841 5270 Rosid View MSA
123742833 5271 Pentapetalae View MSA
122792679 5272 Eudicot View MSA
122051474 5273 Angiosperm View MSA
121345946 5274 Embryophyte View MSA
123424242 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 87.869     High  
cufflinks 21.333        
cufflinks 104.107     High  
cufflinks 22.794        
cufflinks 103.023     High  
cufflinks 18.98       Low

0 Strain