Gene : AT4G09580 A. thaliana TAIR10
Defline:  (1 of 7) KOG3140 - Predicted membrane protein Genomic Order:  768
Name:  ? AT4G09580 Secondary Identifier:  ? PAC:19644158
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G09580 0.5kb upstream 0.5kb upstream 2546 true Chr4: 6052352-6054897 Arabidopsis thaliana
AT4G09580 0.5kb upstream 0.5kb upstream 500 false Chr4: 6054398-6054897 Arabidopsis thaliana
AT4G09580 0.5kb downstream 0.5kb downstream 2546 true Chr4: 6051852-6054397 Arabidopsis thaliana
AT4G09580 0.5kb downstream 0.5kb downstream 500 false Chr4: 6051852-6052351 Arabidopsis thaliana
AT4G09580 1.0kb upstream 1.0kb upstream 3046 true Chr4: 6052352-6055397 Arabidopsis thaliana
AT4G09580 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6054398-6055397 Arabidopsis thaliana
AT4G09580 1.0kb downstream 1.0kb downstream 3046 true Chr4: 6051352-6054397 Arabidopsis thaliana
AT4G09580 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6051352-6052351 Arabidopsis thaliana
AT4G09580 2.0kb upstream 2.0kb upstream 4046 true Chr4: 6052352-6056397 Arabidopsis thaliana
AT4G09580 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6054398-6056397 Arabidopsis thaliana
AT4G09580 2.0kb downstream 2.0kb downstream 4046 true Chr4: 6050352-6054397 Arabidopsis thaliana
AT4G09580 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6050352-6052351 Arabidopsis thaliana
AT4G09580 5.0kb upstream 5.0kb upstream 7046 true Chr4: 6052352-6059397 Arabidopsis thaliana
AT4G09580 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6054398-6059397 Arabidopsis thaliana
AT4G09580 5.0kb downstream 5.0kb downstream 7046 true Chr4: 6047352-6054397 Arabidopsis thaliana
AT4G09580 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6047352-6052351 Arabidopsis thaliana
AT4G09580 10.0kb upstream 10.0kb upstream 12046 true Chr4: 6052352-6064397 Arabidopsis thaliana
AT4G09580 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6054398-6064397 Arabidopsis thaliana
AT4G09580 10.0kb downstream 10.0kb downstream 12046 true Chr4: 6042352-6054397 Arabidopsis thaliana
AT4G09580 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6042352-6052351 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365308 5261 Brassicaceae View MSA
123837673 5264 Brassicales-Malvales View MSA
124343587 5266 SBM View MSA
124250786 5268 Malvidae View MSA
124063946 5270 Rosid View MSA
123748602 5271 Pentapetalae View MSA
122793245 5272 Eudicot View MSA
122048456 5273 Angiosperm View MSA
121348714 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.116        
cufflinks 13.076        
cufflinks 7.315       Low
cufflinks 13.22        
cufflinks 8.082        
cufflinks 12.157        

0 Strain