Gene : NHL22 A. thaliana TAIR10
Primary Identifier:  ? AT4G09590 Defline:  (1 of 8) PTHR31415//PTHR31415:SF2 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED
Genomic Order:  770 Name:  ? AT4G09590
Secondary Identifier:  ? PAC:19645851
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G09590 0.5kb upstream 0.5kb upstream 1136 true Chr4: 6065628-6066763 Arabidopsis thaliana
AT4G09590 0.5kb upstream 0.5kb upstream 500 false Chr4: 6065628-6066127 Arabidopsis thaliana
AT4G09590 0.5kb downstream 0.5kb downstream 1136 true Chr4: 6066128-6067263 Arabidopsis thaliana
AT4G09590 0.5kb downstream 0.5kb downstream 500 false Chr4: 6066764-6067263 Arabidopsis thaliana
AT4G09590 1.0kb upstream 1.0kb upstream 1636 true Chr4: 6065128-6066763 Arabidopsis thaliana
AT4G09590 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6065128-6066127 Arabidopsis thaliana
AT4G09590 1.0kb downstream 1.0kb downstream 1636 true Chr4: 6066128-6067763 Arabidopsis thaliana
AT4G09590 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6066764-6067763 Arabidopsis thaliana
AT4G09590 2.0kb upstream 2.0kb upstream 2636 true Chr4: 6064128-6066763 Arabidopsis thaliana
AT4G09590 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6064128-6066127 Arabidopsis thaliana
AT4G09590 2.0kb downstream 2.0kb downstream 2636 true Chr4: 6066128-6068763 Arabidopsis thaliana
AT4G09590 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6066764-6068763 Arabidopsis thaliana
AT4G09590 5.0kb upstream 5.0kb upstream 5636 true Chr4: 6061128-6066763 Arabidopsis thaliana
AT4G09590 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6061128-6066127 Arabidopsis thaliana
AT4G09590 5.0kb downstream 5.0kb downstream 5636 true Chr4: 6066128-6071763 Arabidopsis thaliana
AT4G09590 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6066764-6071763 Arabidopsis thaliana
AT4G09590 10.0kb upstream 10.0kb upstream 10636 true Chr4: 6056128-6066763 Arabidopsis thaliana
AT4G09590 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6056128-6066127 Arabidopsis thaliana
AT4G09590 10.0kb downstream 10.0kb downstream 10636 true Chr4: 6066128-6076763 Arabidopsis thaliana
AT4G09590 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6066764-6076763 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381892 5261 Brassicaceae View MSA
123803521 5264 Brassicales-Malvales View MSA
124300623 5266 SBM View MSA
124255213 5268 Malvidae View MSA
124052269 5270 Rosid View MSA
123748303 5271 Pentapetalae View MSA
122796873 5272 Eudicot View MSA
122050146 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low  

0 Strain