Gene : AT4G08410 A. thaliana TAIR10
Defline:  (1 of 16) PF04554 - Extensin-like region (Extensin_2) Genomic Order:  658
Name:  ? AT4G08410 Secondary Identifier:  ? PAC:19644757
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G08410 0.5kb upstream 0.5kb upstream 2624 true Chr4: 5339086-5341709 Arabidopsis thaliana
AT4G08410 0.5kb upstream 0.5kb upstream 500 false Chr4: 5341210-5341709 Arabidopsis thaliana
AT4G08410 0.5kb downstream 0.5kb downstream 2624 true Chr4: 5338586-5341209 Arabidopsis thaliana
AT4G08410 0.5kb downstream 0.5kb downstream 500 false Chr4: 5338586-5339085 Arabidopsis thaliana
AT4G08410 1.0kb upstream 1.0kb upstream 3124 true Chr4: 5339086-5342209 Arabidopsis thaliana
AT4G08410 1.0kb upstream 1.0kb upstream 1000 false Chr4: 5341210-5342209 Arabidopsis thaliana
AT4G08410 1.0kb downstream 1.0kb downstream 3124 true Chr4: 5338086-5341209 Arabidopsis thaliana
AT4G08410 1.0kb downstream 1.0kb downstream 1000 false Chr4: 5338086-5339085 Arabidopsis thaliana
AT4G08410 2.0kb upstream 2.0kb upstream 4124 true Chr4: 5339086-5343209 Arabidopsis thaliana
AT4G08410 2.0kb upstream 2.0kb upstream 2000 false Chr4: 5341210-5343209 Arabidopsis thaliana
AT4G08410 2.0kb downstream 2.0kb downstream 4124 true Chr4: 5337086-5341209 Arabidopsis thaliana
AT4G08410 2.0kb downstream 2.0kb downstream 2000 false Chr4: 5337086-5339085 Arabidopsis thaliana
AT4G08410 5.0kb upstream 5.0kb upstream 7124 true Chr4: 5339086-5346209 Arabidopsis thaliana
AT4G08410 5.0kb upstream 5.0kb upstream 5000 false Chr4: 5341210-5346209 Arabidopsis thaliana
AT4G08410 5.0kb downstream 5.0kb downstream 7124 true Chr4: 5334086-5341209 Arabidopsis thaliana
AT4G08410 5.0kb downstream 5.0kb downstream 5000 false Chr4: 5334086-5339085 Arabidopsis thaliana
AT4G08410 10.0kb upstream 10.0kb upstream 12124 true Chr4: 5339086-5351209 Arabidopsis thaliana
AT4G08410 10.0kb upstream 10.0kb upstream 10000 false Chr4: 5341210-5351209 Arabidopsis thaliana
AT4G08410 10.0kb downstream 10.0kb downstream 12124 true Chr4: 5329086-5341209 Arabidopsis thaliana
AT4G08410 10.0kb downstream 10.0kb downstream 10000 false Chr4: 5329086-5339085 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495513 5273 Angiosperm View MSA
122331606 5261 Brassicaceae View MSA
123772768 5264 Brassicales-Malvales View MSA
124271275 5266 SBM View MSA
124127274 5268 Malvidae View MSA
123856136 5270 Rosid View MSA
123442081 5271 Pentapetalae View MSA
122477660 5272 Eudicot View MSA
120768878 5274 Embryophyte View MSA
122811260 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.187     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.29     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.748       High

0 Strain