Gene : ACS6 A. thaliana TAIR10
Primary Identifier:  ? AT4G11280 Defline:  (1 of 2) PTHR11751//PTHR11751:SF380 - SUBGROUP I AMINOTRANSFERASE RELATED // 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 2-RELATED
Genomic Order:  952 Name:  ? AT4G11280
Secondary Identifier:  ? PAC:19644144
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ETHYL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-7270 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G11280 0.5kb upstream 0.5kb upstream 2520 true Chr4: 6863597-6866116 Arabidopsis thaliana
AT4G11280 0.5kb upstream 0.5kb upstream 500 false Chr4: 6863597-6864096 Arabidopsis thaliana
AT4G11280 0.5kb downstream 0.5kb downstream 2520 true Chr4: 6864097-6866616 Arabidopsis thaliana
AT4G11280 0.5kb downstream 0.5kb downstream 500 false Chr4: 6866117-6866616 Arabidopsis thaliana
AT4G11280 1.0kb upstream 1.0kb upstream 3020 true Chr4: 6863097-6866116 Arabidopsis thaliana
AT4G11280 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6863097-6864096 Arabidopsis thaliana
AT4G11280 1.0kb downstream 1.0kb downstream 3020 true Chr4: 6864097-6867116 Arabidopsis thaliana
AT4G11280 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6866117-6867116 Arabidopsis thaliana
AT4G11280 2.0kb upstream 2.0kb upstream 4020 true Chr4: 6862097-6866116 Arabidopsis thaliana
AT4G11280 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6862097-6864096 Arabidopsis thaliana
AT4G11280 2.0kb downstream 2.0kb downstream 4020 true Chr4: 6864097-6868116 Arabidopsis thaliana
AT4G11280 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6866117-6868116 Arabidopsis thaliana
AT4G11280 5.0kb upstream 5.0kb upstream 7020 true Chr4: 6859097-6866116 Arabidopsis thaliana
AT4G11280 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6859097-6864096 Arabidopsis thaliana
AT4G11280 5.0kb downstream 5.0kb downstream 7020 true Chr4: 6864097-6871116 Arabidopsis thaliana
AT4G11280 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6866117-6871116 Arabidopsis thaliana
AT4G11280 10.0kb upstream 10.0kb upstream 12020 true Chr4: 6854097-6866116 Arabidopsis thaliana
AT4G11280 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6854097-6864096 Arabidopsis thaliana
AT4G11280 10.0kb downstream 10.0kb downstream 12020 true Chr4: 6864097-6876116 Arabidopsis thaliana
AT4G11280 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6866117-6876116 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370196 5261 Brassicaceae View MSA
123832800 5264 Brassicales-Malvales View MSA
124351363 5266 SBM View MSA
124243868 5268 Malvidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.564       Low
cufflinks 351.769     High High
cufflinks 40.399     High  
cufflinks 242.186     High  
cufflinks 18.416       Low
cufflinks 271.514     High  

0 Strain