Gene : AT4G10890 A. thaliana TAIR10
Defline:  (1 of 1) PF10382 - Protein of unknown function (DUF2439) (DUF2439) Genomic Order:  912
Name:  ? AT4G10890 Secondary Identifier:  ? PAC:19645651
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G10890 0.5kb upstream 0.5kb upstream 5429 true Chr4: 6688333-6693761 Arabidopsis thaliana
AT4G10890 0.5kb upstream 0.5kb upstream 500 false Chr4: 6688333-6688832 Arabidopsis thaliana
AT4G10890 0.5kb downstream 0.5kb downstream 5429 true Chr4: 6688833-6694261 Arabidopsis thaliana
AT4G10890 0.5kb downstream 0.5kb downstream 500 false Chr4: 6693762-6694261 Arabidopsis thaliana
AT4G10890 1.0kb upstream 1.0kb upstream 5929 true Chr4: 6687833-6693761 Arabidopsis thaliana
AT4G10890 1.0kb upstream 1.0kb upstream 1000 false Chr4: 6687833-6688832 Arabidopsis thaliana
AT4G10890 1.0kb downstream 1.0kb downstream 5929 true Chr4: 6688833-6694761 Arabidopsis thaliana
AT4G10890 1.0kb downstream 1.0kb downstream 1000 false Chr4: 6693762-6694761 Arabidopsis thaliana
AT4G10890 2.0kb upstream 2.0kb upstream 6929 true Chr4: 6686833-6693761 Arabidopsis thaliana
AT4G10890 2.0kb upstream 2.0kb upstream 2000 false Chr4: 6686833-6688832 Arabidopsis thaliana
AT4G10890 2.0kb downstream 2.0kb downstream 6929 true Chr4: 6688833-6695761 Arabidopsis thaliana
AT4G10890 2.0kb downstream 2.0kb downstream 2000 false Chr4: 6693762-6695761 Arabidopsis thaliana
AT4G10890 5.0kb upstream 5.0kb upstream 9929 true Chr4: 6683833-6693761 Arabidopsis thaliana
AT4G10890 5.0kb upstream 5.0kb upstream 5000 false Chr4: 6683833-6688832 Arabidopsis thaliana
AT4G10890 5.0kb downstream 5.0kb downstream 9929 true Chr4: 6688833-6698761 Arabidopsis thaliana
AT4G10890 5.0kb downstream 5.0kb downstream 5000 false Chr4: 6693762-6698761 Arabidopsis thaliana
AT4G10890 10.0kb upstream 10.0kb upstream 14929 true Chr4: 6678833-6693761 Arabidopsis thaliana
AT4G10890 10.0kb upstream 10.0kb upstream 10000 false Chr4: 6678833-6688832 Arabidopsis thaliana
AT4G10890 10.0kb downstream 10.0kb downstream 14929 true Chr4: 6688833-6703761 Arabidopsis thaliana
AT4G10890 10.0kb downstream 10.0kb downstream 10000 false Chr4: 6693762-6703761 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121494752 5273 Angiosperm Singleton cluster - no MSA
122330529 5261 Brassicaceae Singleton cluster - no MSA
123771766 5264 Brassicales-Malvales Singleton cluster - no MSA
124270292 5266 SBM Singleton cluster - no MSA
124126377 5268 Malvidae Singleton cluster - no MSA
123855293 5270 Rosid Singleton cluster - no MSA
123441280 5271 Pentapetalae Singleton cluster - no MSA
122476865 5272 Eudicot Singleton cluster - no MSA
120768121 5274 Embryophyte Singleton cluster - no MSA
122810511 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.254        
cufflinks 2.994       High
cufflinks 1.25        
cufflinks 2.996       High
cufflinks 1.235        
cufflinks 2.618        

0 Strain