Gene : AT4G13360 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11941//PTHR11941:SF47 - ENOYL-COA HYDRATASE-RELATED // 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 3, MITOCHONDRIAL-RELATED Genomic Order:  1175
Name:  ? AT4G13360 Secondary Identifier:  ? PAC:19645505
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7574 Arabidopsis thaliana pathologic  
Athaliana VALDEG-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G13360 0.5kb upstream 0.5kb upstream 3268 true Chr4: 7774628-7777895 Arabidopsis thaliana
AT4G13360 0.5kb upstream 0.5kb upstream 500 false Chr4: 7774628-7775127 Arabidopsis thaliana
AT4G13360 0.5kb downstream 0.5kb downstream 3268 true Chr4: 7775128-7778395 Arabidopsis thaliana
AT4G13360 0.5kb downstream 0.5kb downstream 500 false Chr4: 7777896-7778395 Arabidopsis thaliana
AT4G13360 1.0kb upstream 1.0kb upstream 3768 true Chr4: 7774128-7777895 Arabidopsis thaliana
AT4G13360 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7774128-7775127 Arabidopsis thaliana
AT4G13360 1.0kb downstream 1.0kb downstream 3768 true Chr4: 7775128-7778895 Arabidopsis thaliana
AT4G13360 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7777896-7778895 Arabidopsis thaliana
AT4G13360 2.0kb upstream 2.0kb upstream 4768 true Chr4: 7773128-7777895 Arabidopsis thaliana
AT4G13360 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7773128-7775127 Arabidopsis thaliana
AT4G13360 2.0kb downstream 2.0kb downstream 4768 true Chr4: 7775128-7779895 Arabidopsis thaliana
AT4G13360 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7777896-7779895 Arabidopsis thaliana
AT4G13360 5.0kb upstream 5.0kb upstream 7768 true Chr4: 7770128-7777895 Arabidopsis thaliana
AT4G13360 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7770128-7775127 Arabidopsis thaliana
AT4G13360 5.0kb downstream 5.0kb downstream 7768 true Chr4: 7775128-7782895 Arabidopsis thaliana
AT4G13360 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7777896-7782895 Arabidopsis thaliana
AT4G13360 10.0kb upstream 10.0kb upstream 12768 true Chr4: 7765128-7777895 Arabidopsis thaliana
AT4G13360 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7765128-7775127 Arabidopsis thaliana
AT4G13360 10.0kb downstream 10.0kb downstream 12768 true Chr4: 7775128-7787895 Arabidopsis thaliana
AT4G13360 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7777896-7787895 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369943 5261 Brassicaceae View MSA
123836675 5264 Brassicales-Malvales View MSA
124337240 5266 SBM View MSA
124241377 5268 Malvidae View MSA
124062790 5270 Rosid View MSA
123736402 5271 Pentapetalae View MSA
122794984 5272 Eudicot View MSA
122043157 5273 Angiosperm View MSA
121344613 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.925        
cufflinks 20.301        
cufflinks 23.682        
cufflinks 19.714        
cufflinks 25.034       High
cufflinks 19.608       Low

0 Strain