Gene : AT4G12690 A. thaliana TAIR10
Defline:  (1 of 10) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  1099
Name:  ? AT4G12690 Secondary Identifier:  ? PAC:19644711
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G12690 0.5kb upstream 0.5kb upstream 2010 true Chr4: 7480141-7482150 Arabidopsis thaliana
AT4G12690 0.5kb upstream 0.5kb upstream 500 false Chr4: 7480141-7480640 Arabidopsis thaliana
AT4G12690 0.5kb downstream 0.5kb downstream 2010 true Chr4: 7480641-7482650 Arabidopsis thaliana
AT4G12690 0.5kb downstream 0.5kb downstream 500 false Chr4: 7482151-7482650 Arabidopsis thaliana
AT4G12690 1.0kb upstream 1.0kb upstream 2510 true Chr4: 7479641-7482150 Arabidopsis thaliana
AT4G12690 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7479641-7480640 Arabidopsis thaliana
AT4G12690 1.0kb downstream 1.0kb downstream 2510 true Chr4: 7480641-7483150 Arabidopsis thaliana
AT4G12690 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7482151-7483150 Arabidopsis thaliana
AT4G12690 2.0kb upstream 2.0kb upstream 3510 true Chr4: 7478641-7482150 Arabidopsis thaliana
AT4G12690 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7478641-7480640 Arabidopsis thaliana
AT4G12690 2.0kb downstream 2.0kb downstream 3510 true Chr4: 7480641-7484150 Arabidopsis thaliana
AT4G12690 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7482151-7484150 Arabidopsis thaliana
AT4G12690 5.0kb upstream 5.0kb upstream 6510 true Chr4: 7475641-7482150 Arabidopsis thaliana
AT4G12690 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7475641-7480640 Arabidopsis thaliana
AT4G12690 5.0kb downstream 5.0kb downstream 6510 true Chr4: 7480641-7487150 Arabidopsis thaliana
AT4G12690 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7482151-7487150 Arabidopsis thaliana
AT4G12690 10.0kb upstream 10.0kb upstream 11510 true Chr4: 7470641-7482150 Arabidopsis thaliana
AT4G12690 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7470641-7480640 Arabidopsis thaliana
AT4G12690 10.0kb downstream 10.0kb downstream 11510 true Chr4: 7480641-7492150 Arabidopsis thaliana
AT4G12690 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7482151-7492150 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343343 5261 Brassicaceae View MSA
123783576 5264 Brassicales-Malvales View MSA
124281800 5266 SBM View MSA
124247851 5268 Malvidae View MSA
124067347 5270 Rosid View MSA
123746466 5271 Pentapetalae View MSA
122797152 5272 Eudicot View MSA
122048974 5273 Angiosperm View MSA
121311194 5274 Embryophyte View MSA
123348523 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.534        
cufflinks 0.833        
cufflinks 2.886       High
cufflinks 1.228        
cufflinks 2.279        
cufflinks 0.554       Low

0 Strain