Gene : AZI1 A. thaliana TAIR10
Primary Identifier:  ? AT4G12470 Defline:  (1 of 26) PF14547 - Hydrophobic seed protein (Hydrophob_seed)
Genomic Order:  1077 Name:  ? AT4G12470
Secondary Identifier:  ? PAC:19645763
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G12470 0.5kb upstream 0.5kb upstream 1299 true Chr4: 7401109-7402407 Arabidopsis thaliana
AT4G12470 0.5kb upstream 0.5kb upstream 500 false Chr4: 7401908-7402407 Arabidopsis thaliana
AT4G12470 0.5kb downstream 0.5kb downstream 1299 true Chr4: 7400609-7401907 Arabidopsis thaliana
AT4G12470 0.5kb downstream 0.5kb downstream 500 false Chr4: 7400609-7401108 Arabidopsis thaliana
AT4G12470 1.0kb upstream 1.0kb upstream 1799 true Chr4: 7401109-7402907 Arabidopsis thaliana
AT4G12470 1.0kb upstream 1.0kb upstream 1000 false Chr4: 7401908-7402907 Arabidopsis thaliana
AT4G12470 1.0kb downstream 1.0kb downstream 1799 true Chr4: 7400109-7401907 Arabidopsis thaliana
AT4G12470 1.0kb downstream 1.0kb downstream 1000 false Chr4: 7400109-7401108 Arabidopsis thaliana
AT4G12470 2.0kb upstream 2.0kb upstream 2799 true Chr4: 7401109-7403907 Arabidopsis thaliana
AT4G12470 2.0kb upstream 2.0kb upstream 2000 false Chr4: 7401908-7403907 Arabidopsis thaliana
AT4G12470 2.0kb downstream 2.0kb downstream 2799 true Chr4: 7399109-7401907 Arabidopsis thaliana
AT4G12470 2.0kb downstream 2.0kb downstream 2000 false Chr4: 7399109-7401108 Arabidopsis thaliana
AT4G12470 5.0kb upstream 5.0kb upstream 5799 true Chr4: 7401109-7406907 Arabidopsis thaliana
AT4G12470 5.0kb upstream 5.0kb upstream 5000 false Chr4: 7401908-7406907 Arabidopsis thaliana
AT4G12470 5.0kb downstream 5.0kb downstream 5799 true Chr4: 7396109-7401907 Arabidopsis thaliana
AT4G12470 5.0kb downstream 5.0kb downstream 5000 false Chr4: 7396109-7401108 Arabidopsis thaliana
AT4G12470 10.0kb upstream 10.0kb upstream 10799 true Chr4: 7401109-7411907 Arabidopsis thaliana
AT4G12470 10.0kb upstream 10.0kb upstream 10000 false Chr4: 7401908-7411907 Arabidopsis thaliana
AT4G12470 10.0kb downstream 10.0kb downstream 10799 true Chr4: 7391109-7401907 Arabidopsis thaliana
AT4G12470 10.0kb downstream 10.0kb downstream 10000 false Chr4: 7391109-7401108 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381316 5261 Brassicaceae View MSA
123803177 5264 Brassicales-Malvales View MSA
124300307 5266 SBM View MSA
124253928 5268 Malvidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.072       Low
cufflinks 29.883     High  
cufflinks 34.355     High  
cufflinks 19.271        
cufflinks 30.521     High  
cufflinks 26.647        

0 Strain