Gene : AT4G15020 A. thaliana TAIR10
Defline:  (1 of 2) PTHR32166//PTHR32166:SF27 - FAMILY NOT NAMED // HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1381
Name:  ? AT4G15020 Secondary Identifier:  ? PAC:19644032
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G15020 0.5kb upstream 0.5kb upstream 3803 true Chr4: 8574886-8578688 Arabidopsis thaliana
AT4G15020 0.5kb upstream 0.5kb upstream 500 false Chr4: 8574886-8575385 Arabidopsis thaliana
AT4G15020 0.5kb downstream 0.5kb downstream 3803 true Chr4: 8575386-8579188 Arabidopsis thaliana
AT4G15020 0.5kb downstream 0.5kb downstream 500 false Chr4: 8578689-8579188 Arabidopsis thaliana
AT4G15020 1.0kb upstream 1.0kb upstream 4303 true Chr4: 8574386-8578688 Arabidopsis thaliana
AT4G15020 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8574386-8575385 Arabidopsis thaliana
AT4G15020 1.0kb downstream 1.0kb downstream 4303 true Chr4: 8575386-8579688 Arabidopsis thaliana
AT4G15020 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8578689-8579688 Arabidopsis thaliana
AT4G15020 2.0kb upstream 2.0kb upstream 5303 true Chr4: 8573386-8578688 Arabidopsis thaliana
AT4G15020 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8573386-8575385 Arabidopsis thaliana
AT4G15020 2.0kb downstream 2.0kb downstream 5303 true Chr4: 8575386-8580688 Arabidopsis thaliana
AT4G15020 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8578689-8580688 Arabidopsis thaliana
AT4G15020 5.0kb upstream 5.0kb upstream 8303 true Chr4: 8570386-8578688 Arabidopsis thaliana
AT4G15020 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8570386-8575385 Arabidopsis thaliana
AT4G15020 5.0kb downstream 5.0kb downstream 8303 true Chr4: 8575386-8583688 Arabidopsis thaliana
AT4G15020 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8578689-8583688 Arabidopsis thaliana
AT4G15020 10.0kb upstream 10.0kb upstream 13303 true Chr4: 8565386-8578688 Arabidopsis thaliana
AT4G15020 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8565386-8575385 Arabidopsis thaliana
AT4G15020 10.0kb downstream 10.0kb downstream 13303 true Chr4: 8575386-8588688 Arabidopsis thaliana
AT4G15020 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8578689-8588688 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374138 5261 Brassicaceae View MSA
123840638 5264 Brassicales-Malvales View MSA
124339493 5266 SBM View MSA
124251676 5268 Malvidae View MSA
124071231 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.413        
cufflinks 5.045        
cufflinks 2.768       Low
cufflinks 5.831        
cufflinks 3.027       Low
cufflinks 5.738        

0 Strain