Gene : bHLH104 A. thaliana TAIR10
Primary Identifier:  ? AT4G14410 Defline:  (1 of 2) PTHR23042:SF72 - TRANSCRIPTION FACTOR BHLH104-RELATED
Genomic Order:  1307 Name:  ? AT4G14410
Secondary Identifier:  ? PAC:19647986
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G14410 0.5kb upstream 0.5kb upstream 2409 true Chr4: 8299259-8301667 Arabidopsis thaliana
AT4G14410 0.5kb upstream 0.5kb upstream 500 false Chr4: 8299259-8299758 Arabidopsis thaliana
AT4G14410 0.5kb downstream 0.5kb downstream 2409 true Chr4: 8299759-8302167 Arabidopsis thaliana
AT4G14410 0.5kb downstream 0.5kb downstream 500 false Chr4: 8301668-8302167 Arabidopsis thaliana
AT4G14410 1.0kb upstream 1.0kb upstream 2909 true Chr4: 8298759-8301667 Arabidopsis thaliana
AT4G14410 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8298759-8299758 Arabidopsis thaliana
AT4G14410 1.0kb downstream 1.0kb downstream 2909 true Chr4: 8299759-8302667 Arabidopsis thaliana
AT4G14410 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8301668-8302667 Arabidopsis thaliana
AT4G14410 2.0kb upstream 2.0kb upstream 3909 true Chr4: 8297759-8301667 Arabidopsis thaliana
AT4G14410 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8297759-8299758 Arabidopsis thaliana
AT4G14410 2.0kb downstream 2.0kb downstream 3909 true Chr4: 8299759-8303667 Arabidopsis thaliana
AT4G14410 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8301668-8303667 Arabidopsis thaliana
AT4G14410 5.0kb upstream 5.0kb upstream 6909 true Chr4: 8294759-8301667 Arabidopsis thaliana
AT4G14410 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8294759-8299758 Arabidopsis thaliana
AT4G14410 5.0kb downstream 5.0kb downstream 6909 true Chr4: 8299759-8306667 Arabidopsis thaliana
AT4G14410 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8301668-8306667 Arabidopsis thaliana
AT4G14410 10.0kb upstream 10.0kb upstream 11909 true Chr4: 8289759-8301667 Arabidopsis thaliana
AT4G14410 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8289759-8299758 Arabidopsis thaliana
AT4G14410 10.0kb downstream 10.0kb downstream 11909 true Chr4: 8299759-8311667 Arabidopsis thaliana
AT4G14410 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8301668-8311667 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368994 5261 Brassicaceae View MSA
123834177 5264 Brassicales-Malvales View MSA
124349370 5266 SBM View MSA
124244215 5268 Malvidae View MSA
124074840 5270 Rosid View MSA
123739971 5271 Pentapetalae View MSA
122794387 5272 Eudicot View MSA
122050434 5273 Angiosperm View MSA
121311906 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.962        
cufflinks 29.659     High High
cufflinks 11.269        
cufflinks 27.708       High
cufflinks 11.192        
cufflinks 21.596        

0 Strain