Gene : AT4G17020 A. thaliana TAIR10
Defline:  (1 of 1) K03144 - transcription initiation factor TFIIH subunit 4 (TFIIH4, GTF2H4, TFB2) Genomic Order:  1625
Name:  ? AT4G17020 Secondary Identifier:  ? PAC:19645809
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G17020 0.5kb upstream 0.5kb upstream 4164 true Chr4: 9577776-9581939 Arabidopsis thaliana
AT4G17020 0.5kb upstream 0.5kb upstream 500 false Chr4: 9581440-9581939 Arabidopsis thaliana
AT4G17020 0.5kb downstream 0.5kb downstream 4164 true Chr4: 9577276-9581439 Arabidopsis thaliana
AT4G17020 0.5kb downstream 0.5kb downstream 500 false Chr4: 9577276-9577775 Arabidopsis thaliana
AT4G17020 1.0kb upstream 1.0kb upstream 4664 true Chr4: 9577776-9582439 Arabidopsis thaliana
AT4G17020 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9581440-9582439 Arabidopsis thaliana
AT4G17020 1.0kb downstream 1.0kb downstream 4664 true Chr4: 9576776-9581439 Arabidopsis thaliana
AT4G17020 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9576776-9577775 Arabidopsis thaliana
AT4G17020 2.0kb upstream 2.0kb upstream 5664 true Chr4: 9577776-9583439 Arabidopsis thaliana
AT4G17020 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9581440-9583439 Arabidopsis thaliana
AT4G17020 2.0kb downstream 2.0kb downstream 5664 true Chr4: 9575776-9581439 Arabidopsis thaliana
AT4G17020 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9575776-9577775 Arabidopsis thaliana
AT4G17020 5.0kb upstream 5.0kb upstream 8664 true Chr4: 9577776-9586439 Arabidopsis thaliana
AT4G17020 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9581440-9586439 Arabidopsis thaliana
AT4G17020 5.0kb downstream 5.0kb downstream 8664 true Chr4: 9572776-9581439 Arabidopsis thaliana
AT4G17020 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9572776-9577775 Arabidopsis thaliana
AT4G17020 10.0kb upstream 10.0kb upstream 13664 true Chr4: 9577776-9591439 Arabidopsis thaliana
AT4G17020 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9581440-9591439 Arabidopsis thaliana
AT4G17020 10.0kb downstream 10.0kb downstream 13664 true Chr4: 9567776-9581439 Arabidopsis thaliana
AT4G17020 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9567776-9577775 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371854 5261 Brassicaceae View MSA
123832858 5264 Brassicales-Malvales View MSA
124321828 5266 SBM View MSA
124238934 5268 Malvidae View MSA
124050287 5270 Rosid View MSA
123747685 5271 Pentapetalae View MSA
122797891 5272 Eudicot View MSA
122042198 5273 Angiosperm View MSA
121346770 5274 Embryophyte View MSA
123427579 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.383        
cufflinks 2.049       High
cufflinks 1.422        
cufflinks 1.999        
cufflinks 1.38        
cufflinks 1.98        

0 Strain