Gene : ACX1 A. thaliana TAIR10
Primary Identifier:  ? AT4G16760 Defline:  (1 of 1) PTHR10909:SF250 - PEROXISOMAL ACYL-COENZYME A OXIDASE 2
Genomic Order:  1595 Name:  ? AT4G16760
Secondary Identifier:  ? PAC:19645055
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5136 Arabidopsis thaliana pathologic  
Athaliana PWY-561 Arabidopsis thaliana pathologic  
Athaliana PWY-6837 Arabidopsis thaliana pathologic  
Athaliana PWY-735 Arabidopsis thaliana pathologic  
Athaliana PWY-7606 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G16760 0.5kb upstream 0.5kb upstream 4763 true Chr4: 9424633-9429395 Arabidopsis thaliana
AT4G16760 0.5kb upstream 0.5kb upstream 500 false Chr4: 9428896-9429395 Arabidopsis thaliana
AT4G16760 0.5kb downstream 0.5kb downstream 4763 true Chr4: 9424133-9428895 Arabidopsis thaliana
AT4G16760 0.5kb downstream 0.5kb downstream 500 false Chr4: 9424133-9424632 Arabidopsis thaliana
AT4G16760 1.0kb upstream 1.0kb upstream 5263 true Chr4: 9424633-9429895 Arabidopsis thaliana
AT4G16760 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9428896-9429895 Arabidopsis thaliana
AT4G16760 1.0kb downstream 1.0kb downstream 5263 true Chr4: 9423633-9428895 Arabidopsis thaliana
AT4G16760 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9423633-9424632 Arabidopsis thaliana
AT4G16760 2.0kb upstream 2.0kb upstream 6263 true Chr4: 9424633-9430895 Arabidopsis thaliana
AT4G16760 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9428896-9430895 Arabidopsis thaliana
AT4G16760 2.0kb downstream 2.0kb downstream 6263 true Chr4: 9422633-9428895 Arabidopsis thaliana
AT4G16760 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9422633-9424632 Arabidopsis thaliana
AT4G16760 5.0kb upstream 5.0kb upstream 9263 true Chr4: 9424633-9433895 Arabidopsis thaliana
AT4G16760 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9428896-9433895 Arabidopsis thaliana
AT4G16760 5.0kb downstream 5.0kb downstream 9263 true Chr4: 9419633-9428895 Arabidopsis thaliana
AT4G16760 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9419633-9424632 Arabidopsis thaliana
AT4G16760 10.0kb upstream 10.0kb upstream 14263 true Chr4: 9424633-9438895 Arabidopsis thaliana
AT4G16760 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9428896-9438895 Arabidopsis thaliana
AT4G16760 10.0kb downstream 10.0kb downstream 14263 true Chr4: 9414633-9428895 Arabidopsis thaliana
AT4G16760 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9414633-9424632 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370678 5261 Brassicaceae View MSA
123837272 5264 Brassicales-Malvales View MSA
124342369 5266 SBM View MSA
124238723 5268 Malvidae View MSA
124065660 5270 Rosid View MSA
123739070 5271 Pentapetalae View MSA
122787917 5272 Eudicot View MSA
122045798 5273 Angiosperm View MSA
121345655 5274 Embryophyte View MSA
123428216 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.175       Low
cufflinks 14.91        
cufflinks 16.846        
cufflinks 18.957        
cufflinks 28.347     High High
cufflinks 15.331        

0 Strain