Gene : SPK1 A. thaliana TAIR10
Primary Identifier:  ? AT4G16340 Defline:  (1 of 1) PTHR23317//PTHR23317:SF76 - DEDICATOR OF CYTOKINESIS DOCK // LD20667P
Genomic Order:  1544 Name:  ? AT4G16340
Secondary Identifier:  ? PAC:19647831
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G16340 0.5kb upstream 0.5kb upstream 13633 true Chr4: 9228185-9241817 Arabidopsis thaliana
AT4G16340 0.5kb upstream 0.5kb upstream 500 false Chr4: 9241318-9241817 Arabidopsis thaliana
AT4G16340 0.5kb downstream 0.5kb downstream 13633 true Chr4: 9227685-9241317 Arabidopsis thaliana
AT4G16340 0.5kb downstream 0.5kb downstream 500 false Chr4: 9227685-9228184 Arabidopsis thaliana
AT4G16340 1.0kb upstream 1.0kb upstream 14133 true Chr4: 9228185-9242317 Arabidopsis thaliana
AT4G16340 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9241318-9242317 Arabidopsis thaliana
AT4G16340 1.0kb downstream 1.0kb downstream 14133 true Chr4: 9227185-9241317 Arabidopsis thaliana
AT4G16340 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9227185-9228184 Arabidopsis thaliana
AT4G16340 2.0kb upstream 2.0kb upstream 15133 true Chr4: 9228185-9243317 Arabidopsis thaliana
AT4G16340 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9241318-9243317 Arabidopsis thaliana
AT4G16340 2.0kb downstream 2.0kb downstream 15133 true Chr4: 9226185-9241317 Arabidopsis thaliana
AT4G16340 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9226185-9228184 Arabidopsis thaliana
AT4G16340 5.0kb upstream 5.0kb upstream 18133 true Chr4: 9228185-9246317 Arabidopsis thaliana
AT4G16340 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9241318-9246317 Arabidopsis thaliana
AT4G16340 5.0kb downstream 5.0kb downstream 18133 true Chr4: 9223185-9241317 Arabidopsis thaliana
AT4G16340 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9223185-9228184 Arabidopsis thaliana
AT4G16340 10.0kb upstream 10.0kb upstream 23133 true Chr4: 9228185-9251317 Arabidopsis thaliana
AT4G16340 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9241318-9251317 Arabidopsis thaliana
AT4G16340 10.0kb downstream 10.0kb downstream 23133 true Chr4: 9218185-9241317 Arabidopsis thaliana
AT4G16340 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9218185-9228184 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367767 5261 Brassicaceae View MSA
123827775 5264 Brassicales-Malvales View MSA
124340623 5266 SBM View MSA
124238020 5268 Malvidae View MSA
124065907 5270 Rosid View MSA
123738871 5271 Pentapetalae View MSA
122792789 5272 Eudicot View MSA
122047198 5273 Angiosperm View MSA
121347939 5274 Embryophyte View MSA
123380681 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.629        
cufflinks 12.048        
cufflinks 4.844        
cufflinks 12.369        
cufflinks 3.925       Low
cufflinks 16.656       High

0 Strain