Gene : AT4G16100 A. thaliana TAIR10
Defline:  (1 of 11) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  1513
Name:  ? AT4G16100 Secondary Identifier:  ? PAC:19647787
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G16100 0.5kb upstream 0.5kb upstream 2940 true Chr4: 9105220-9108159 Arabidopsis thaliana
AT4G16100 0.5kb upstream 0.5kb upstream 500 false Chr4: 9105220-9105719 Arabidopsis thaliana
AT4G16100 0.5kb downstream 0.5kb downstream 2940 true Chr4: 9105720-9108659 Arabidopsis thaliana
AT4G16100 0.5kb downstream 0.5kb downstream 500 false Chr4: 9108160-9108659 Arabidopsis thaliana
AT4G16100 1.0kb upstream 1.0kb upstream 3440 true Chr4: 9104720-9108159 Arabidopsis thaliana
AT4G16100 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9104720-9105719 Arabidopsis thaliana
AT4G16100 1.0kb downstream 1.0kb downstream 3440 true Chr4: 9105720-9109159 Arabidopsis thaliana
AT4G16100 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9108160-9109159 Arabidopsis thaliana
AT4G16100 2.0kb upstream 2.0kb upstream 4440 true Chr4: 9103720-9108159 Arabidopsis thaliana
AT4G16100 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9103720-9105719 Arabidopsis thaliana
AT4G16100 2.0kb downstream 2.0kb downstream 4440 true Chr4: 9105720-9110159 Arabidopsis thaliana
AT4G16100 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9108160-9110159 Arabidopsis thaliana
AT4G16100 5.0kb upstream 5.0kb upstream 7440 true Chr4: 9100720-9108159 Arabidopsis thaliana
AT4G16100 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9100720-9105719 Arabidopsis thaliana
AT4G16100 5.0kb downstream 5.0kb downstream 7440 true Chr4: 9105720-9113159 Arabidopsis thaliana
AT4G16100 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9108160-9113159 Arabidopsis thaliana
AT4G16100 10.0kb upstream 10.0kb upstream 12440 true Chr4: 9095720-9108159 Arabidopsis thaliana
AT4G16100 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9095720-9105719 Arabidopsis thaliana
AT4G16100 10.0kb downstream 10.0kb downstream 12440 true Chr4: 9105720-9118159 Arabidopsis thaliana
AT4G16100 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9108160-9118159 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375826 5261 Brassicaceae View MSA
123839555 5264 Brassicales-Malvales View MSA
124342535 5266 SBM View MSA
124240564 5268 Malvidae View MSA
124072368 5270 Rosid View MSA
123748837 5271 Pentapetalae View MSA
122797134 5272 Eudicot View MSA
122049051 5273 Angiosperm View MSA
121347224 5274 Embryophyte View MSA
123425809 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.593        
cufflinks 4.533        
cufflinks 3.246       Low
cufflinks 5.297       High
cufflinks 3.507        
cufflinks 4.673        

0 Strain