Gene : AT4G17950 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31500//PTHR31500:SF17 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  1726
Name:  ? AT4G17950 Secondary Identifier:  ? PAC:19647636
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G17950 0.5kb upstream 0.5kb upstream 2743 true Chr4: 9966990-9969732 Arabidopsis thaliana
AT4G17950 0.5kb upstream 0.5kb upstream 500 false Chr4: 9969233-9969732 Arabidopsis thaliana
AT4G17950 0.5kb downstream 0.5kb downstream 2743 true Chr4: 9966490-9969232 Arabidopsis thaliana
AT4G17950 0.5kb downstream 0.5kb downstream 500 false Chr4: 9966490-9966989 Arabidopsis thaliana
AT4G17950 1.0kb upstream 1.0kb upstream 3243 true Chr4: 9966990-9970232 Arabidopsis thaliana
AT4G17950 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9969233-9970232 Arabidopsis thaliana
AT4G17950 1.0kb downstream 1.0kb downstream 3243 true Chr4: 9965990-9969232 Arabidopsis thaliana
AT4G17950 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9965990-9966989 Arabidopsis thaliana
AT4G17950 2.0kb upstream 2.0kb upstream 4243 true Chr4: 9966990-9971232 Arabidopsis thaliana
AT4G17950 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9969233-9971232 Arabidopsis thaliana
AT4G17950 2.0kb downstream 2.0kb downstream 4243 true Chr4: 9964990-9969232 Arabidopsis thaliana
AT4G17950 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9964990-9966989 Arabidopsis thaliana
AT4G17950 5.0kb upstream 5.0kb upstream 7243 true Chr4: 9966990-9974232 Arabidopsis thaliana
AT4G17950 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9969233-9974232 Arabidopsis thaliana
AT4G17950 5.0kb downstream 5.0kb downstream 7243 true Chr4: 9961990-9969232 Arabidopsis thaliana
AT4G17950 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9961990-9966989 Arabidopsis thaliana
AT4G17950 10.0kb upstream 10.0kb upstream 12243 true Chr4: 9966990-9979232 Arabidopsis thaliana
AT4G17950 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9969233-9979232 Arabidopsis thaliana
AT4G17950 10.0kb downstream 10.0kb downstream 12243 true Chr4: 9956990-9969232 Arabidopsis thaliana
AT4G17950 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9956990-9966989 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364389 5261 Brassicaceae View MSA
123839060 5264 Brassicales-Malvales View MSA
124346948 5266 SBM View MSA
124250687 5268 Malvidae View MSA
124064410 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.445       Low
cufflinks 23.996        
cufflinks 14.992        
cufflinks 25.091        
cufflinks 16.459        
cufflinks 28.946       High

0 Strain