Gene : TPS5 A. thaliana TAIR10
Primary Identifier:  ? AT4G17770 Defline:  (1 of 2) PTHR10788:SF48 - ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6
Genomic Order:  1706 Name:  ? AT4G17770
Secondary Identifier:  ? PAC:19645460
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G17770 0.5kb upstream 0.5kb upstream 4517 true Chr4: 9875738-9880254 Arabidopsis thaliana
AT4G17770 0.5kb upstream 0.5kb upstream 500 false Chr4: 9875738-9876237 Arabidopsis thaliana
AT4G17770 0.5kb downstream 0.5kb downstream 4517 true Chr4: 9876238-9880754 Arabidopsis thaliana
AT4G17770 0.5kb downstream 0.5kb downstream 500 false Chr4: 9880255-9880754 Arabidopsis thaliana
AT4G17770 1.0kb upstream 1.0kb upstream 5017 true Chr4: 9875238-9880254 Arabidopsis thaliana
AT4G17770 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9875238-9876237 Arabidopsis thaliana
AT4G17770 1.0kb downstream 1.0kb downstream 5017 true Chr4: 9876238-9881254 Arabidopsis thaliana
AT4G17770 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9880255-9881254 Arabidopsis thaliana
AT4G17770 2.0kb upstream 2.0kb upstream 6017 true Chr4: 9874238-9880254 Arabidopsis thaliana
AT4G17770 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9874238-9876237 Arabidopsis thaliana
AT4G17770 2.0kb downstream 2.0kb downstream 6017 true Chr4: 9876238-9882254 Arabidopsis thaliana
AT4G17770 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9880255-9882254 Arabidopsis thaliana
AT4G17770 5.0kb upstream 5.0kb upstream 9017 true Chr4: 9871238-9880254 Arabidopsis thaliana
AT4G17770 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9871238-9876237 Arabidopsis thaliana
AT4G17770 5.0kb downstream 5.0kb downstream 9017 true Chr4: 9876238-9885254 Arabidopsis thaliana
AT4G17770 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9880255-9885254 Arabidopsis thaliana
AT4G17770 10.0kb upstream 10.0kb upstream 14017 true Chr4: 9866238-9880254 Arabidopsis thaliana
AT4G17770 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9866238-9876237 Arabidopsis thaliana
AT4G17770 10.0kb downstream 10.0kb downstream 14017 true Chr4: 9876238-9890254 Arabidopsis thaliana
AT4G17770 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9880255-9890254 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361067 5261 Brassicaceae View MSA
123828341 5264 Brassicales-Malvales View MSA
124345779 5266 SBM View MSA
124244704 5268 Malvidae View MSA
124065335 5270 Rosid View MSA
123751102 5271 Pentapetalae View MSA
122786361 5272 Eudicot View MSA
122049755 5273 Angiosperm View MSA
121348711 5274 Embryophyte View MSA
123425695 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.71        
cufflinks 13.662        
cufflinks 7.124        
cufflinks 12.861        
cufflinks 5.873       Low
cufflinks 14.013        

0 Strain