Gene : AT4G17080 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23084//PTHR23084:SF163 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED // SUBFAMILY NOT NAMED Genomic Order:  1631
Name:  ? AT4G17080 Secondary Identifier:  ? PAC:19648859
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6351 Arabidopsis thaliana pathologic  
Athaliana PWY-6352 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G17080 0.5kb upstream 0.5kb upstream 3257 true Chr4: 9600951-9604207 Arabidopsis thaliana
AT4G17080 0.5kb upstream 0.5kb upstream 500 false Chr4: 9600951-9601450 Arabidopsis thaliana
AT4G17080 0.5kb downstream 0.5kb downstream 3257 true Chr4: 9601451-9604707 Arabidopsis thaliana
AT4G17080 0.5kb downstream 0.5kb downstream 500 false Chr4: 9604208-9604707 Arabidopsis thaliana
AT4G17080 1.0kb upstream 1.0kb upstream 3757 true Chr4: 9600451-9604207 Arabidopsis thaliana
AT4G17080 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9600451-9601450 Arabidopsis thaliana
AT4G17080 1.0kb downstream 1.0kb downstream 3757 true Chr4: 9601451-9605207 Arabidopsis thaliana
AT4G17080 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9604208-9605207 Arabidopsis thaliana
AT4G17080 2.0kb upstream 2.0kb upstream 4757 true Chr4: 9599451-9604207 Arabidopsis thaliana
AT4G17080 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9599451-9601450 Arabidopsis thaliana
AT4G17080 2.0kb downstream 2.0kb downstream 4757 true Chr4: 9601451-9606207 Arabidopsis thaliana
AT4G17080 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9604208-9606207 Arabidopsis thaliana
AT4G17080 5.0kb upstream 5.0kb upstream 7757 true Chr4: 9596451-9604207 Arabidopsis thaliana
AT4G17080 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9596451-9601450 Arabidopsis thaliana
AT4G17080 5.0kb downstream 5.0kb downstream 7757 true Chr4: 9601451-9609207 Arabidopsis thaliana
AT4G17080 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9604208-9609207 Arabidopsis thaliana
AT4G17080 10.0kb upstream 10.0kb upstream 12757 true Chr4: 9591451-9604207 Arabidopsis thaliana
AT4G17080 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9591451-9601450 Arabidopsis thaliana
AT4G17080 10.0kb downstream 10.0kb downstream 12757 true Chr4: 9601451-9614207 Arabidopsis thaliana
AT4G17080 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9604208-9614207 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380056 5261 Brassicaceae View MSA
123839636 5264 Brassicales-Malvales View MSA
124340371 5266 SBM View MSA
124254332 5268 Malvidae View MSA
124068935 5270 Rosid View MSA
123741886 5271 Pentapetalae View MSA
122788830 5272 Eudicot View MSA
122047970 5273 Angiosperm View MSA
121346800 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.555        
cufflinks 8.37        
cufflinks 8.503        
cufflinks 9.98       High
cufflinks 9.215        
cufflinks 7.666       Low

0 Strain