Gene : ARA7 A. thaliana TAIR10
Primary Identifier:  ? AT4G19640 Defline:  (1 of 2) K07889 - Ras-related protein Rab-5C (RAB5C)
Genomic Order:  1914 Name:  ? AT4G19640
Secondary Identifier:  ? PAC:19648125
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0 Pathways

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Expression

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7 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G19640 0.5kb upstream 0.5kb upstream 2920 true Chr4: 10687198-10690117 Arabidopsis thaliana
AT4G19640 0.5kb upstream 0.5kb upstream 500 false Chr4: 10689618-10690117 Arabidopsis thaliana
AT4G19640 0.5kb downstream 0.5kb downstream 2920 true Chr4: 10686698-10689617 Arabidopsis thaliana
AT4G19640 0.5kb downstream 0.5kb downstream 500 false Chr4: 10686698-10687197 Arabidopsis thaliana
AT4G19640 1.0kb upstream 1.0kb upstream 3420 true Chr4: 10687198-10690617 Arabidopsis thaliana
AT4G19640 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10689618-10690617 Arabidopsis thaliana
AT4G19640 1.0kb downstream 1.0kb downstream 3420 true Chr4: 10686198-10689617 Arabidopsis thaliana
AT4G19640 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10686198-10687197 Arabidopsis thaliana
AT4G19640 2.0kb upstream 2.0kb upstream 4420 true Chr4: 10687198-10691617 Arabidopsis thaliana
AT4G19640 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10689618-10691617 Arabidopsis thaliana
AT4G19640 2.0kb downstream 2.0kb downstream 4420 true Chr4: 10685198-10689617 Arabidopsis thaliana
AT4G19640 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10685198-10687197 Arabidopsis thaliana
AT4G19640 5.0kb upstream 5.0kb upstream 7420 true Chr4: 10687198-10694617 Arabidopsis thaliana
AT4G19640 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10689618-10694617 Arabidopsis thaliana
AT4G19640 5.0kb downstream 5.0kb downstream 7420 true Chr4: 10682198-10689617 Arabidopsis thaliana
AT4G19640 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10682198-10687197 Arabidopsis thaliana
AT4G19640 10.0kb upstream 10.0kb upstream 12420 true Chr4: 10687198-10699617 Arabidopsis thaliana
AT4G19640 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10689618-10699617 Arabidopsis thaliana
AT4G19640 10.0kb downstream 10.0kb downstream 12420 true Chr4: 10677198-10689617 Arabidopsis thaliana
AT4G19640 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10677198-10687197 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371780 5261 Brassicaceae View MSA
123836956 5264 Brassicales-Malvales View MSA
124346320 5266 SBM View MSA
124254268 5268 Malvidae View MSA
124066553 5270 Rosid View MSA
123753240 5271 Pentapetalae View MSA
122795840 5272 Eudicot View MSA
122049622 5273 Angiosperm View MSA
121344376 5274 Embryophyte View MSA
123424016 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.612        
cufflinks 33.075     High  
cufflinks 20.665       Low
cufflinks 36.058     High High
cufflinks 28.04     High  
cufflinks 31.867     High  

0 Strain