Gene : AT4G21705 A. thaliana TAIR10
Defline:  (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2127
Name:  ? AT4G21705 Secondary Identifier:  ? PAC:19646713
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G21705 0.5kb upstream 0.5kb upstream 2377 true Chr4: 11532971-11535347 Arabidopsis thaliana
AT4G21705 0.5kb upstream 0.5kb upstream 500 false Chr4: 11534848-11535347 Arabidopsis thaliana
AT4G21705 0.5kb downstream 0.5kb downstream 2377 true Chr4: 11532471-11534847 Arabidopsis thaliana
AT4G21705 0.5kb downstream 0.5kb downstream 500 false Chr4: 11532471-11532970 Arabidopsis thaliana
AT4G21705 1.0kb upstream 1.0kb upstream 2877 true Chr4: 11532971-11535847 Arabidopsis thaliana
AT4G21705 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11534848-11535847 Arabidopsis thaliana
AT4G21705 1.0kb downstream 1.0kb downstream 2877 true Chr4: 11531971-11534847 Arabidopsis thaliana
AT4G21705 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11531971-11532970 Arabidopsis thaliana
AT4G21705 2.0kb upstream 2.0kb upstream 3877 true Chr4: 11532971-11536847 Arabidopsis thaliana
AT4G21705 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11534848-11536847 Arabidopsis thaliana
AT4G21705 2.0kb downstream 2.0kb downstream 3877 true Chr4: 11530971-11534847 Arabidopsis thaliana
AT4G21705 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11530971-11532970 Arabidopsis thaliana
AT4G21705 5.0kb upstream 5.0kb upstream 6877 true Chr4: 11532971-11539847 Arabidopsis thaliana
AT4G21705 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11534848-11539847 Arabidopsis thaliana
AT4G21705 5.0kb downstream 5.0kb downstream 6877 true Chr4: 11527971-11534847 Arabidopsis thaliana
AT4G21705 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11527971-11532970 Arabidopsis thaliana
AT4G21705 10.0kb upstream 10.0kb upstream 11877 true Chr4: 11532971-11544847 Arabidopsis thaliana
AT4G21705 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11534848-11544847 Arabidopsis thaliana
AT4G21705 10.0kb downstream 10.0kb downstream 11877 true Chr4: 11522971-11534847 Arabidopsis thaliana
AT4G21705 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11522971-11532970 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373988 5261 Brassicaceae View MSA
123835432 5264 Brassicales-Malvales View MSA
124336812 5266 SBM View MSA
124237223 5268 Malvidae View MSA
124072029 5270 Rosid View MSA
123744765 5271 Pentapetalae View MSA
122790014 5272 Eudicot View MSA
122049142 5273 Angiosperm View MSA
121311265 5274 Embryophyte View MSA
123348580 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.881       High
cufflinks 3.193        
cufflinks 4.481        
cufflinks 3.41        
cufflinks 3.649        
cufflinks 3.155        

0 Strain