Gene : JMJ14 A. thaliana TAIR10
Primary Identifier:  ? AT4G20400 Defline:  (1 of 3) PTHR10694:SF41 - JUMONJI DOMAIN-CONTAINING PROTEIN 18-RELATED
Genomic Order:  1996 Name:  ? AT4G20400
Secondary Identifier:  ? PAC:19645317
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G20400 0.5kb upstream 0.5kb upstream 5695 true Chr4: 11008166-11013860 Arabidopsis thaliana
AT4G20400 0.5kb upstream 0.5kb upstream 500 false Chr4: 11008166-11008665 Arabidopsis thaliana
AT4G20400 0.5kb downstream 0.5kb downstream 5695 true Chr4: 11008666-11014360 Arabidopsis thaliana
AT4G20400 0.5kb downstream 0.5kb downstream 500 false Chr4: 11013861-11014360 Arabidopsis thaliana
AT4G20400 1.0kb upstream 1.0kb upstream 6195 true Chr4: 11007666-11013860 Arabidopsis thaliana
AT4G20400 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11007666-11008665 Arabidopsis thaliana
AT4G20400 1.0kb downstream 1.0kb downstream 6195 true Chr4: 11008666-11014860 Arabidopsis thaliana
AT4G20400 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11013861-11014860 Arabidopsis thaliana
AT4G20400 2.0kb upstream 2.0kb upstream 7195 true Chr4: 11006666-11013860 Arabidopsis thaliana
AT4G20400 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11006666-11008665 Arabidopsis thaliana
AT4G20400 2.0kb downstream 2.0kb downstream 7195 true Chr4: 11008666-11015860 Arabidopsis thaliana
AT4G20400 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11013861-11015860 Arabidopsis thaliana
AT4G20400 5.0kb upstream 5.0kb upstream 10195 true Chr4: 11003666-11013860 Arabidopsis thaliana
AT4G20400 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11003666-11008665 Arabidopsis thaliana
AT4G20400 5.0kb downstream 5.0kb downstream 10195 true Chr4: 11008666-11018860 Arabidopsis thaliana
AT4G20400 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11013861-11018860 Arabidopsis thaliana
AT4G20400 10.0kb upstream 10.0kb upstream 15195 true Chr4: 10998666-11013860 Arabidopsis thaliana
AT4G20400 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10998666-11008665 Arabidopsis thaliana
AT4G20400 10.0kb downstream 10.0kb downstream 15195 true Chr4: 11008666-11023860 Arabidopsis thaliana
AT4G20400 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11013861-11023860 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366040 5261 Brassicaceae View MSA
123838081 5264 Brassicales-Malvales View MSA
124345494 5266 SBM View MSA
124251575 5268 Malvidae View MSA
124068572 5270 Rosid View MSA
123751211 5271 Pentapetalae View MSA
122797514 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.593        
cufflinks 7.497        
cufflinks 5.351        
cufflinks 8.079       High
cufflinks 5.264       Low
cufflinks 7.754        

0 Strain