Gene : AT4G20300 A. thaliana TAIR10
Defline:  (1 of 9) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  1985
Name:  ? AT4G20300 Secondary Identifier:  ? PAC:19648182
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G20300 0.5kb upstream 0.5kb upstream 4276 true Chr4: 10954938-10959213 Arabidopsis thaliana
AT4G20300 0.5kb upstream 0.5kb upstream 500 false Chr4: 10954938-10955437 Arabidopsis thaliana
AT4G20300 0.5kb downstream 0.5kb downstream 4276 true Chr4: 10955438-10959713 Arabidopsis thaliana
AT4G20300 0.5kb downstream 0.5kb downstream 500 false Chr4: 10959214-10959713 Arabidopsis thaliana
AT4G20300 1.0kb upstream 1.0kb upstream 4776 true Chr4: 10954438-10959213 Arabidopsis thaliana
AT4G20300 1.0kb upstream 1.0kb upstream 1000 false Chr4: 10954438-10955437 Arabidopsis thaliana
AT4G20300 1.0kb downstream 1.0kb downstream 4776 true Chr4: 10955438-10960213 Arabidopsis thaliana
AT4G20300 1.0kb downstream 1.0kb downstream 1000 false Chr4: 10959214-10960213 Arabidopsis thaliana
AT4G20300 2.0kb upstream 2.0kb upstream 5776 true Chr4: 10953438-10959213 Arabidopsis thaliana
AT4G20300 2.0kb upstream 2.0kb upstream 2000 false Chr4: 10953438-10955437 Arabidopsis thaliana
AT4G20300 2.0kb downstream 2.0kb downstream 5776 true Chr4: 10955438-10961213 Arabidopsis thaliana
AT4G20300 2.0kb downstream 2.0kb downstream 2000 false Chr4: 10959214-10961213 Arabidopsis thaliana
AT4G20300 5.0kb upstream 5.0kb upstream 8776 true Chr4: 10950438-10959213 Arabidopsis thaliana
AT4G20300 5.0kb upstream 5.0kb upstream 5000 false Chr4: 10950438-10955437 Arabidopsis thaliana
AT4G20300 5.0kb downstream 5.0kb downstream 8776 true Chr4: 10955438-10964213 Arabidopsis thaliana
AT4G20300 5.0kb downstream 5.0kb downstream 5000 false Chr4: 10959214-10964213 Arabidopsis thaliana
AT4G20300 10.0kb upstream 10.0kb upstream 13776 true Chr4: 10945438-10959213 Arabidopsis thaliana
AT4G20300 10.0kb upstream 10.0kb upstream 10000 false Chr4: 10945438-10955437 Arabidopsis thaliana
AT4G20300 10.0kb downstream 10.0kb downstream 13776 true Chr4: 10955438-10969213 Arabidopsis thaliana
AT4G20300 10.0kb downstream 10.0kb downstream 10000 false Chr4: 10959214-10969213 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374818 5261 Brassicaceae View MSA
123838359 5264 Brassicales-Malvales View MSA
124348413 5266 SBM View MSA
124245958 5268 Malvidae View MSA
124068290 5270 Rosid View MSA
123746076 5271 Pentapetalae View MSA
122796883 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.958       Low
cufflinks 8.629        
cufflinks 4.468        
cufflinks 9.822       High
cufflinks 4.458        
cufflinks 7.873        

0 Strain