Gene : GSH1 A. thaliana TAIR10
Primary Identifier:  ? AT4G23100 Defline:  (1 of 1) 6.3.2.2 - Glutamate--cysteine ligase / Gamma-glutamylcysteine synthetase
Genomic Order:  2286 Name:  ? AT4G23100
Secondary Identifier:  ? PAC:19648926
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLUTATHIONESYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23100 0.5kb upstream 0.5kb upstream 5826 true Chr4: 12102135-12107960 Arabidopsis thaliana
AT4G23100 0.5kb upstream 0.5kb upstream 500 false Chr4: 12107461-12107960 Arabidopsis thaliana
AT4G23100 0.5kb downstream 0.5kb downstream 5826 true Chr4: 12101635-12107460 Arabidopsis thaliana
AT4G23100 0.5kb downstream 0.5kb downstream 500 false Chr4: 12101635-12102134 Arabidopsis thaliana
AT4G23100 1.0kb upstream 1.0kb upstream 6326 true Chr4: 12102135-12108460 Arabidopsis thaliana
AT4G23100 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12107461-12108460 Arabidopsis thaliana
AT4G23100 1.0kb downstream 1.0kb downstream 6326 true Chr4: 12101135-12107460 Arabidopsis thaliana
AT4G23100 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12101135-12102134 Arabidopsis thaliana
AT4G23100 2.0kb upstream 2.0kb upstream 7326 true Chr4: 12102135-12109460 Arabidopsis thaliana
AT4G23100 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12107461-12109460 Arabidopsis thaliana
AT4G23100 2.0kb downstream 2.0kb downstream 7326 true Chr4: 12100135-12107460 Arabidopsis thaliana
AT4G23100 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12100135-12102134 Arabidopsis thaliana
AT4G23100 5.0kb upstream 5.0kb upstream 10326 true Chr4: 12102135-12112460 Arabidopsis thaliana
AT4G23100 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12107461-12112460 Arabidopsis thaliana
AT4G23100 5.0kb downstream 5.0kb downstream 10326 true Chr4: 12097135-12107460 Arabidopsis thaliana
AT4G23100 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12097135-12102134 Arabidopsis thaliana
AT4G23100 10.0kb upstream 10.0kb upstream 15326 true Chr4: 12102135-12117460 Arabidopsis thaliana
AT4G23100 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12107461-12117460 Arabidopsis thaliana
AT4G23100 10.0kb downstream 10.0kb downstream 15326 true Chr4: 12092135-12107460 Arabidopsis thaliana
AT4G23100 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12092135-12102134 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369004 5261 Brassicaceae View MSA
123839403 5264 Brassicales-Malvales View MSA
124343642 5266 SBM View MSA
124247556 5268 Malvidae View MSA
124066026 5270 Rosid View MSA
123737554 5271 Pentapetalae View MSA
122790790 5272 Eudicot View MSA
122044028 5273 Angiosperm View MSA
121346589 5274 Embryophyte View MSA
123424300 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.312       Low
cufflinks 29.081        
cufflinks 24.632        
cufflinks 33.134     High High
cufflinks 26.062     High  
cufflinks 28.806        

0 Strain