Gene : PGI1 A. thaliana TAIR10
Primary Identifier:  ? AT4G24620 Defline:  (1 of 2) 5.3.1.9 - Glucose-6-phosphate isomerase / Phosphosaccharomutase
Genomic Order:  2451 Name:  ? AT4G24620
Secondary Identifier:  ? PAC:19644908
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Ontology Annotation Displayer

10 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ANAEROFRUCAT-PWY Arabidopsis thaliana pathologic  
Athaliana ANAGLYCOLYSIS-PWY Arabidopsis thaliana pathologic  
Athaliana GLUCONEO-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-3801 Arabidopsis thaliana pathologic  
Athaliana PWY-5659 Arabidopsis thaliana pathologic  
Athaliana PWY-621 Arabidopsis thaliana pathologic  
Athaliana PWY-622 Arabidopsis thaliana pathologic  
Athaliana PWY66-399 Arabidopsis thaliana pathologic  
Athaliana PWY-7238 Arabidopsis thaliana pathologic  
Athaliana SUCSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G24620 0.5kb upstream 0.5kb upstream 4574 true Chr4: 12708752-12713325 Arabidopsis thaliana
AT4G24620 0.5kb upstream 0.5kb upstream 500 false Chr4: 12712826-12713325 Arabidopsis thaliana
AT4G24620 0.5kb downstream 0.5kb downstream 4574 true Chr4: 12708252-12712825 Arabidopsis thaliana
AT4G24620 0.5kb downstream 0.5kb downstream 500 false Chr4: 12708252-12708751 Arabidopsis thaliana
AT4G24620 1.0kb upstream 1.0kb upstream 5074 true Chr4: 12708752-12713825 Arabidopsis thaliana
AT4G24620 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12712826-12713825 Arabidopsis thaliana
AT4G24620 1.0kb downstream 1.0kb downstream 5074 true Chr4: 12707752-12712825 Arabidopsis thaliana
AT4G24620 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12707752-12708751 Arabidopsis thaliana
AT4G24620 2.0kb upstream 2.0kb upstream 6074 true Chr4: 12708752-12714825 Arabidopsis thaliana
AT4G24620 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12712826-12714825 Arabidopsis thaliana
AT4G24620 2.0kb downstream 2.0kb downstream 6074 true Chr4: 12706752-12712825 Arabidopsis thaliana
AT4G24620 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12706752-12708751 Arabidopsis thaliana
AT4G24620 5.0kb upstream 5.0kb upstream 9074 true Chr4: 12708752-12717825 Arabidopsis thaliana
AT4G24620 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12712826-12717825 Arabidopsis thaliana
AT4G24620 5.0kb downstream 5.0kb downstream 9074 true Chr4: 12703752-12712825 Arabidopsis thaliana
AT4G24620 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12703752-12708751 Arabidopsis thaliana
AT4G24620 10.0kb upstream 10.0kb upstream 14074 true Chr4: 12708752-12722825 Arabidopsis thaliana
AT4G24620 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12712826-12722825 Arabidopsis thaliana
AT4G24620 10.0kb downstream 10.0kb downstream 14074 true Chr4: 12698752-12712825 Arabidopsis thaliana
AT4G24620 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12698752-12708751 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362814 5261 Brassicaceae View MSA
123828439 5264 Brassicales-Malvales View MSA
124337380 5266 SBM View MSA
124246382 5268 Malvidae View MSA
124069574 5270 Rosid View MSA
123741998 5271 Pentapetalae View MSA
122794429 5272 Eudicot View MSA
122048619 5273 Angiosperm View MSA
121347898 5274 Embryophyte View MSA
123424804 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.464        
cufflinks 13.371        
cufflinks 14.29        
cufflinks 15.143        
cufflinks 12.396        
cufflinks 17.435       High

0 Strain