Gene : AT4G24440 A. thaliana TAIR10
Defline:  (1 of 1) K03123 - transcription initiation factor TFIIA small subunit (TFIIA2, GTF2A2, TOA2) Genomic Order:  2433
Name:  ? AT4G24440 Secondary Identifier:  ? PAC:19647806
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G24440 0.5kb upstream 0.5kb upstream 2081 true Chr4: 12632680-12634760 Arabidopsis thaliana
AT4G24440 0.5kb upstream 0.5kb upstream 500 false Chr4: 12632680-12633179 Arabidopsis thaliana
AT4G24440 0.5kb downstream 0.5kb downstream 2081 true Chr4: 12633180-12635260 Arabidopsis thaliana
AT4G24440 0.5kb downstream 0.5kb downstream 500 false Chr4: 12634761-12635260 Arabidopsis thaliana
AT4G24440 1.0kb upstream 1.0kb upstream 2581 true Chr4: 12632180-12634760 Arabidopsis thaliana
AT4G24440 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12632180-12633179 Arabidopsis thaliana
AT4G24440 1.0kb downstream 1.0kb downstream 2581 true Chr4: 12633180-12635760 Arabidopsis thaliana
AT4G24440 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12634761-12635760 Arabidopsis thaliana
AT4G24440 2.0kb upstream 2.0kb upstream 3581 true Chr4: 12631180-12634760 Arabidopsis thaliana
AT4G24440 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12631180-12633179 Arabidopsis thaliana
AT4G24440 2.0kb downstream 2.0kb downstream 3581 true Chr4: 12633180-12636760 Arabidopsis thaliana
AT4G24440 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12634761-12636760 Arabidopsis thaliana
AT4G24440 5.0kb upstream 5.0kb upstream 6581 true Chr4: 12628180-12634760 Arabidopsis thaliana
AT4G24440 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12628180-12633179 Arabidopsis thaliana
AT4G24440 5.0kb downstream 5.0kb downstream 6581 true Chr4: 12633180-12639760 Arabidopsis thaliana
AT4G24440 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12634761-12639760 Arabidopsis thaliana
AT4G24440 10.0kb upstream 10.0kb upstream 11581 true Chr4: 12623180-12634760 Arabidopsis thaliana
AT4G24440 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12623180-12633179 Arabidopsis thaliana
AT4G24440 10.0kb downstream 10.0kb downstream 11581 true Chr4: 12633180-12644760 Arabidopsis thaliana
AT4G24440 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12634761-12644760 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364167 5261 Brassicaceae View MSA
123839671 5264 Brassicales-Malvales View MSA
124342942 5266 SBM View MSA
124244097 5268 Malvidae View MSA
124060415 5270 Rosid View MSA
123747373 5271 Pentapetalae View MSA
122787968 5272 Eudicot View MSA
122045425 5273 Angiosperm View MSA
121349813 5274 Embryophyte View MSA
123423825 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.881        
cufflinks 7.213        
cufflinks 5.43        
cufflinks 6.845        
cufflinks 4.972       Low
cufflinks 6.464        

0 Strain