Gene : AT4G24380 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22778//PTHR22778:SF19 - OVARIAN CANCER GENE-2 PROTEIN-RELATED Genomic Order:  2427
Name:  ? AT4G24380 Secondary Identifier:  ? PAC:19648368
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G24380 0.5kb upstream 0.5kb upstream 1685 true Chr4: 12612035-12613719 Arabidopsis thaliana
AT4G24380 0.5kb upstream 0.5kb upstream 500 false Chr4: 12612035-12612534 Arabidopsis thaliana
AT4G24380 0.5kb downstream 0.5kb downstream 1685 true Chr4: 12612535-12614219 Arabidopsis thaliana
AT4G24380 0.5kb downstream 0.5kb downstream 500 false Chr4: 12613720-12614219 Arabidopsis thaliana
AT4G24380 1.0kb upstream 1.0kb upstream 2185 true Chr4: 12611535-12613719 Arabidopsis thaliana
AT4G24380 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12611535-12612534 Arabidopsis thaliana
AT4G24380 1.0kb downstream 1.0kb downstream 2185 true Chr4: 12612535-12614719 Arabidopsis thaliana
AT4G24380 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12613720-12614719 Arabidopsis thaliana
AT4G24380 2.0kb upstream 2.0kb upstream 3185 true Chr4: 12610535-12613719 Arabidopsis thaliana
AT4G24380 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12610535-12612534 Arabidopsis thaliana
AT4G24380 2.0kb downstream 2.0kb downstream 3185 true Chr4: 12612535-12615719 Arabidopsis thaliana
AT4G24380 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12613720-12615719 Arabidopsis thaliana
AT4G24380 5.0kb upstream 5.0kb upstream 6185 true Chr4: 12607535-12613719 Arabidopsis thaliana
AT4G24380 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12607535-12612534 Arabidopsis thaliana
AT4G24380 5.0kb downstream 5.0kb downstream 6185 true Chr4: 12612535-12618719 Arabidopsis thaliana
AT4G24380 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12613720-12618719 Arabidopsis thaliana
AT4G24380 10.0kb upstream 10.0kb upstream 11185 true Chr4: 12602535-12613719 Arabidopsis thaliana
AT4G24380 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12602535-12612534 Arabidopsis thaliana
AT4G24380 10.0kb downstream 10.0kb downstream 11185 true Chr4: 12612535-12623719 Arabidopsis thaliana
AT4G24380 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12613720-12623719 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377352 5261 Brassicaceae View MSA
123832573 5264 Brassicales-Malvales View MSA
124339761 5266 SBM View MSA
124236958 5268 Malvidae View MSA
124064450 5270 Rosid View MSA
123736447 5271 Pentapetalae View MSA
122793262 5272 Eudicot View MSA
122046471 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348869 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.178       Low
cufflinks 138.936     High High
cufflinks 17.355        
cufflinks 85.03     High  
cufflinks 8.102       Low
cufflinks 94.555     High  

0 Strain