Gene : BTI1 A. thaliana TAIR10
Primary Identifier:  ? AT4G23630 Defline:  (1 of 17) KOG1792 - Reticulon
Genomic Order:  2344 Name:  ? AT4G23630
Secondary Identifier:  ? PAC:19644752
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23630 0.5kb upstream 0.5kb upstream 3379 true Chr4: 12316559-12319937 Arabidopsis thaliana
AT4G23630 0.5kb upstream 0.5kb upstream 500 false Chr4: 12316559-12317058 Arabidopsis thaliana
AT4G23630 0.5kb downstream 0.5kb downstream 3379 true Chr4: 12317059-12320437 Arabidopsis thaliana
AT4G23630 0.5kb downstream 0.5kb downstream 500 false Chr4: 12319938-12320437 Arabidopsis thaliana
AT4G23630 1.0kb upstream 1.0kb upstream 3879 true Chr4: 12316059-12319937 Arabidopsis thaliana
AT4G23630 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12316059-12317058 Arabidopsis thaliana
AT4G23630 1.0kb downstream 1.0kb downstream 3879 true Chr4: 12317059-12320937 Arabidopsis thaliana
AT4G23630 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12319938-12320937 Arabidopsis thaliana
AT4G23630 2.0kb upstream 2.0kb upstream 4879 true Chr4: 12315059-12319937 Arabidopsis thaliana
AT4G23630 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12315059-12317058 Arabidopsis thaliana
AT4G23630 2.0kb downstream 2.0kb downstream 4879 true Chr4: 12317059-12321937 Arabidopsis thaliana
AT4G23630 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12319938-12321937 Arabidopsis thaliana
AT4G23630 5.0kb upstream 5.0kb upstream 7879 true Chr4: 12312059-12319937 Arabidopsis thaliana
AT4G23630 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12312059-12317058 Arabidopsis thaliana
AT4G23630 5.0kb downstream 5.0kb downstream 7879 true Chr4: 12317059-12324937 Arabidopsis thaliana
AT4G23630 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12319938-12324937 Arabidopsis thaliana
AT4G23630 10.0kb upstream 10.0kb upstream 12879 true Chr4: 12307059-12319937 Arabidopsis thaliana
AT4G23630 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12307059-12317058 Arabidopsis thaliana
AT4G23630 10.0kb downstream 10.0kb downstream 12879 true Chr4: 12317059-12329937 Arabidopsis thaliana
AT4G23630 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12319938-12329937 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366047 5261 Brassicaceae View MSA
123799096 5264 Brassicales-Malvales View MSA
124349804 5266 SBM View MSA
124252411 5268 Malvidae View MSA
124069227 5270 Rosid View MSA
123749221 5271 Pentapetalae View MSA
122790829 5272 Eudicot View MSA
122049511 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 70.649     High  
cufflinks 132.555     High  
cufflinks 55.898     High Low
cufflinks 146.416     High  
cufflinks 67.893     High  
cufflinks 156.572     High High

0 Strain