Gene : AT4G25410 A. thaliana TAIR10
Defline:  (1 of 6) PTHR13935//PTHR13935:SF54 - ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED // TRANSCRIPTION FACTOR BHLH118-RELATED Genomic Order:  2535
Name:  ? AT4G25410 Secondary Identifier:  ? PAC:19644501
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G25410 0.5kb upstream 0.5kb upstream 1963 true Chr4: 12985255-12987217 Arabidopsis thaliana
AT4G25410 0.5kb upstream 0.5kb upstream 500 false Chr4: 12985255-12985754 Arabidopsis thaliana
AT4G25410 0.5kb downstream 0.5kb downstream 1963 true Chr4: 12985755-12987717 Arabidopsis thaliana
AT4G25410 0.5kb downstream 0.5kb downstream 500 false Chr4: 12987218-12987717 Arabidopsis thaliana
AT4G25410 1.0kb upstream 1.0kb upstream 2463 true Chr4: 12984755-12987217 Arabidopsis thaliana
AT4G25410 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12984755-12985754 Arabidopsis thaliana
AT4G25410 1.0kb downstream 1.0kb downstream 2463 true Chr4: 12985755-12988217 Arabidopsis thaliana
AT4G25410 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12987218-12988217 Arabidopsis thaliana
AT4G25410 2.0kb upstream 2.0kb upstream 3463 true Chr4: 12983755-12987217 Arabidopsis thaliana
AT4G25410 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12983755-12985754 Arabidopsis thaliana
AT4G25410 2.0kb downstream 2.0kb downstream 3463 true Chr4: 12985755-12989217 Arabidopsis thaliana
AT4G25410 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12987218-12989217 Arabidopsis thaliana
AT4G25410 5.0kb upstream 5.0kb upstream 6463 true Chr4: 12980755-12987217 Arabidopsis thaliana
AT4G25410 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12980755-12985754 Arabidopsis thaliana
AT4G25410 5.0kb downstream 5.0kb downstream 6463 true Chr4: 12985755-12992217 Arabidopsis thaliana
AT4G25410 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12987218-12992217 Arabidopsis thaliana
AT4G25410 10.0kb upstream 10.0kb upstream 11463 true Chr4: 12975755-12987217 Arabidopsis thaliana
AT4G25410 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12975755-12985754 Arabidopsis thaliana
AT4G25410 10.0kb downstream 10.0kb downstream 11463 true Chr4: 12985755-12997217 Arabidopsis thaliana
AT4G25410 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12987218-12997217 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377156 5261 Brassicaceae View MSA
123837803 5264 Brassicales-Malvales View MSA
124351097 5266 SBM View MSA
124249323 5268 Malvidae View MSA
124073139 5270 Rosid View MSA
123750941 5271 Pentapetalae View MSA
122792125 5272 Eudicot View MSA
122050150 5273 Angiosperm View MSA
121311764 5274 Embryophyte View MSA
123349017 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.134     Low  
cufflinks 4.8        
cufflinks 0.216     Low  
cufflinks 8.251       High
cufflinks 0.049     Low Low
cufflinks 6.544        

0 Strain