Gene : EXPB3 A. thaliana TAIR10
Primary Identifier:  ? AT4G28250 Defline:  (1 of 1) PTHR31692//PTHR31692:SF5 - FAMILY NOT NAMED // EXPANSIN-B1-RELATED
Genomic Order:  2845 Name:  ? AT4G28250
Secondary Identifier:  ? PAC:19646037
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Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28250 0.5kb upstream 0.5kb upstream 2532 true Chr4: 14000038-14002569 Arabidopsis thaliana
AT4G28250 0.5kb upstream 0.5kb upstream 500 false Chr4: 14002070-14002569 Arabidopsis thaliana
AT4G28250 0.5kb downstream 0.5kb downstream 2532 true Chr4: 13999538-14002069 Arabidopsis thaliana
AT4G28250 0.5kb downstream 0.5kb downstream 500 false Chr4: 13999538-14000037 Arabidopsis thaliana
AT4G28250 1.0kb upstream 1.0kb upstream 3032 true Chr4: 14000038-14003069 Arabidopsis thaliana
AT4G28250 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14002070-14003069 Arabidopsis thaliana
AT4G28250 1.0kb downstream 1.0kb downstream 3032 true Chr4: 13999038-14002069 Arabidopsis thaliana
AT4G28250 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13999038-14000037 Arabidopsis thaliana
AT4G28250 2.0kb upstream 2.0kb upstream 4032 true Chr4: 14000038-14004069 Arabidopsis thaliana
AT4G28250 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14002070-14004069 Arabidopsis thaliana
AT4G28250 2.0kb downstream 2.0kb downstream 4032 true Chr4: 13998038-14002069 Arabidopsis thaliana
AT4G28250 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13998038-14000037 Arabidopsis thaliana
AT4G28250 5.0kb upstream 5.0kb upstream 7032 true Chr4: 14000038-14007069 Arabidopsis thaliana
AT4G28250 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14002070-14007069 Arabidopsis thaliana
AT4G28250 5.0kb downstream 5.0kb downstream 7032 true Chr4: 13995038-14002069 Arabidopsis thaliana
AT4G28250 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13995038-14000037 Arabidopsis thaliana
AT4G28250 10.0kb upstream 10.0kb upstream 12032 true Chr4: 14000038-14012069 Arabidopsis thaliana
AT4G28250 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14002070-14012069 Arabidopsis thaliana
AT4G28250 10.0kb downstream 10.0kb downstream 12032 true Chr4: 13990038-14002069 Arabidopsis thaliana
AT4G28250 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13990038-14000037 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040952 5273 Angiosperm View MSA
122376685 5261 Brassicaceae View MSA
123827355 5264 Brassicales-Malvales View MSA
124343909 5266 SBM View MSA
124242006 5268 Malvidae View MSA
124061780 5270 Rosid View MSA
123742041 5271 Pentapetalae View MSA
122787625 5272 Eudicot View MSA
123429074 5275 Viridiplantae View MSA
121351768 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.417        
cufflinks 88.884     High  
cufflinks 1.431       Low
cufflinks 79.621     High  
cufflinks 1.341       Low
cufflinks 101.011     High  

0 Strain