Gene : AT4G27790 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10827//PTHR10827:SF54 - RETICULOCALBIN // CALCIUM-BINDING EF HAND FAMILY PROTEIN Genomic Order:  2794
Name:  ? AT4G27790 Secondary Identifier:  ? PAC:19645712
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27790 0.5kb upstream 0.5kb upstream 1988 true Chr4: 13849546-13851533 Arabidopsis thaliana
AT4G27790 0.5kb upstream 0.5kb upstream 500 false Chr4: 13849546-13850045 Arabidopsis thaliana
AT4G27790 0.5kb downstream 0.5kb downstream 1988 true Chr4: 13850046-13852033 Arabidopsis thaliana
AT4G27790 0.5kb downstream 0.5kb downstream 500 false Chr4: 13851534-13852033 Arabidopsis thaliana
AT4G27790 1.0kb upstream 1.0kb upstream 2488 true Chr4: 13849046-13851533 Arabidopsis thaliana
AT4G27790 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13849046-13850045 Arabidopsis thaliana
AT4G27790 1.0kb downstream 1.0kb downstream 2488 true Chr4: 13850046-13852533 Arabidopsis thaliana
AT4G27790 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13851534-13852533 Arabidopsis thaliana
AT4G27790 2.0kb upstream 2.0kb upstream 3488 true Chr4: 13848046-13851533 Arabidopsis thaliana
AT4G27790 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13848046-13850045 Arabidopsis thaliana
AT4G27790 2.0kb downstream 2.0kb downstream 3488 true Chr4: 13850046-13853533 Arabidopsis thaliana
AT4G27790 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13851534-13853533 Arabidopsis thaliana
AT4G27790 5.0kb upstream 5.0kb upstream 6488 true Chr4: 13845046-13851533 Arabidopsis thaliana
AT4G27790 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13845046-13850045 Arabidopsis thaliana
AT4G27790 5.0kb downstream 5.0kb downstream 6488 true Chr4: 13850046-13856533 Arabidopsis thaliana
AT4G27790 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13851534-13856533 Arabidopsis thaliana
AT4G27790 10.0kb upstream 10.0kb upstream 11488 true Chr4: 13840046-13851533 Arabidopsis thaliana
AT4G27790 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13840046-13850045 Arabidopsis thaliana
AT4G27790 10.0kb downstream 10.0kb downstream 11488 true Chr4: 13850046-13861533 Arabidopsis thaliana
AT4G27790 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13851534-13861533 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372399 5261 Brassicaceae View MSA
123829918 5264 Brassicales-Malvales View MSA
124344512 5266 SBM View MSA
124237315 5268 Malvidae View MSA
124050130 5270 Rosid View MSA
123750102 5271 Pentapetalae View MSA
122788650 5272 Eudicot View MSA
122049125 5273 Angiosperm View MSA
121311258 5274 Embryophyte View MSA
123348573 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low Low
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low  
cufflinks 0.011     Low  
cufflinks 0.064     Low High

0 Strain