Gene : TPS4 A. thaliana TAIR10
Primary Identifier:  ? AT4G27550 Defline:  (1 of 4) PTHR10788//PTHR10788:SF6 - TREHALOSE-6-PHOSPHATE SYNTHASE // BCDNA.GH08860
Genomic Order:  2765 Name:  ? AT4G27550
Secondary Identifier:  ? PAC:19647587
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27550 0.5kb upstream 0.5kb upstream 4592 true Chr4: 13755149-13759740 Arabidopsis thaliana
AT4G27550 0.5kb upstream 0.5kb upstream 500 false Chr4: 13755149-13755648 Arabidopsis thaliana
AT4G27550 0.5kb downstream 0.5kb downstream 4592 true Chr4: 13755649-13760240 Arabidopsis thaliana
AT4G27550 0.5kb downstream 0.5kb downstream 500 false Chr4: 13759741-13760240 Arabidopsis thaliana
AT4G27550 1.0kb upstream 1.0kb upstream 5092 true Chr4: 13754649-13759740 Arabidopsis thaliana
AT4G27550 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13754649-13755648 Arabidopsis thaliana
AT4G27550 1.0kb downstream 1.0kb downstream 5092 true Chr4: 13755649-13760740 Arabidopsis thaliana
AT4G27550 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13759741-13760740 Arabidopsis thaliana
AT4G27550 2.0kb upstream 2.0kb upstream 6092 true Chr4: 13753649-13759740 Arabidopsis thaliana
AT4G27550 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13753649-13755648 Arabidopsis thaliana
AT4G27550 2.0kb downstream 2.0kb downstream 6092 true Chr4: 13755649-13761740 Arabidopsis thaliana
AT4G27550 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13759741-13761740 Arabidopsis thaliana
AT4G27550 5.0kb upstream 5.0kb upstream 9092 true Chr4: 13750649-13759740 Arabidopsis thaliana
AT4G27550 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13750649-13755648 Arabidopsis thaliana
AT4G27550 5.0kb downstream 5.0kb downstream 9092 true Chr4: 13755649-13764740 Arabidopsis thaliana
AT4G27550 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13759741-13764740 Arabidopsis thaliana
AT4G27550 10.0kb upstream 10.0kb upstream 14092 true Chr4: 13745649-13759740 Arabidopsis thaliana
AT4G27550 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13745649-13755648 Arabidopsis thaliana
AT4G27550 10.0kb downstream 10.0kb downstream 14092 true Chr4: 13755649-13769740 Arabidopsis thaliana
AT4G27550 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13759741-13769740 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362955 5261 Brassicaceae View MSA
123798457 5264 Brassicales-Malvales View MSA
124296089 5266 SBM View MSA
124251076 5268 Malvidae View MSA
124068150 5270 Rosid View MSA
123743549 5271 Pentapetalae View MSA
122786791 5272 Eudicot View MSA
122045463 5273 Angiosperm View MSA
121344657 5274 Embryophyte View MSA
123428106 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low Low
cufflinks 0.171     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.223     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.184     Low  

0 Strain