Gene : AT4G27290 A. thaliana TAIR10
Defline:  (1 of 12) PF00954//PF01453//PF07714//PF08276 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) Genomic Order:  2737
Name:  ? AT4G27290 Secondary Identifier:  ? PAC:19647074
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27290 0.5kb upstream 0.5kb upstream 3422 true Chr4: 13665781-13669202 Arabidopsis thaliana
AT4G27290 0.5kb upstream 0.5kb upstream 500 false Chr4: 13665781-13666280 Arabidopsis thaliana
AT4G27290 0.5kb downstream 0.5kb downstream 3422 true Chr4: 13666281-13669702 Arabidopsis thaliana
AT4G27290 0.5kb downstream 0.5kb downstream 500 false Chr4: 13669203-13669702 Arabidopsis thaliana
AT4G27290 1.0kb upstream 1.0kb upstream 3922 true Chr4: 13665281-13669202 Arabidopsis thaliana
AT4G27290 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13665281-13666280 Arabidopsis thaliana
AT4G27290 1.0kb downstream 1.0kb downstream 3922 true Chr4: 13666281-13670202 Arabidopsis thaliana
AT4G27290 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13669203-13670202 Arabidopsis thaliana
AT4G27290 2.0kb upstream 2.0kb upstream 4922 true Chr4: 13664281-13669202 Arabidopsis thaliana
AT4G27290 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13664281-13666280 Arabidopsis thaliana
AT4G27290 2.0kb downstream 2.0kb downstream 4922 true Chr4: 13666281-13671202 Arabidopsis thaliana
AT4G27290 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13669203-13671202 Arabidopsis thaliana
AT4G27290 5.0kb upstream 5.0kb upstream 7922 true Chr4: 13661281-13669202 Arabidopsis thaliana
AT4G27290 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13661281-13666280 Arabidopsis thaliana
AT4G27290 5.0kb downstream 5.0kb downstream 7922 true Chr4: 13666281-13674202 Arabidopsis thaliana
AT4G27290 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13669203-13674202 Arabidopsis thaliana
AT4G27290 10.0kb upstream 10.0kb upstream 12922 true Chr4: 13656281-13669202 Arabidopsis thaliana
AT4G27290 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13656281-13666280 Arabidopsis thaliana
AT4G27290 10.0kb downstream 10.0kb downstream 12922 true Chr4: 13666281-13679202 Arabidopsis thaliana
AT4G27290 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13669203-13679202 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344144 5261 Brassicaceae View MSA
123836825 5264 Brassicales-Malvales View MSA
124350841 5266 SBM View MSA
124252991 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.05     Low  
cufflinks 0.791        
cufflinks 0.012     Low Low
cufflinks 2.159       High
cufflinks 0.135     Low  
cufflinks 0.902        

0 Strain