Gene : AT4G28820 A. thaliana TAIR10
Defline:  (1 of 1) KOG2857 - Predicted MYND Zn-finger protein/hormone receptor interactor Genomic Order:  2913
Name:  ? AT4G28820 Secondary Identifier:  ? PAC:19648157
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28820 0.5kb upstream 0.5kb upstream 2148 true Chr4: 14230695-14232842 Arabidopsis thaliana
AT4G28820 0.5kb upstream 0.5kb upstream 500 false Chr4: 14232343-14232842 Arabidopsis thaliana
AT4G28820 0.5kb downstream 0.5kb downstream 2148 true Chr4: 14230195-14232342 Arabidopsis thaliana
AT4G28820 0.5kb downstream 0.5kb downstream 500 false Chr4: 14230195-14230694 Arabidopsis thaliana
AT4G28820 1.0kb upstream 1.0kb upstream 2648 true Chr4: 14230695-14233342 Arabidopsis thaliana
AT4G28820 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14232343-14233342 Arabidopsis thaliana
AT4G28820 1.0kb downstream 1.0kb downstream 2648 true Chr4: 14229695-14232342 Arabidopsis thaliana
AT4G28820 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14229695-14230694 Arabidopsis thaliana
AT4G28820 2.0kb upstream 2.0kb upstream 3648 true Chr4: 14230695-14234342 Arabidopsis thaliana
AT4G28820 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14232343-14234342 Arabidopsis thaliana
AT4G28820 2.0kb downstream 2.0kb downstream 3648 true Chr4: 14228695-14232342 Arabidopsis thaliana
AT4G28820 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14228695-14230694 Arabidopsis thaliana
AT4G28820 5.0kb upstream 5.0kb upstream 6648 true Chr4: 14230695-14237342 Arabidopsis thaliana
AT4G28820 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14232343-14237342 Arabidopsis thaliana
AT4G28820 5.0kb downstream 5.0kb downstream 6648 true Chr4: 14225695-14232342 Arabidopsis thaliana
AT4G28820 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14225695-14230694 Arabidopsis thaliana
AT4G28820 10.0kb upstream 10.0kb upstream 11648 true Chr4: 14230695-14242342 Arabidopsis thaliana
AT4G28820 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14232343-14242342 Arabidopsis thaliana
AT4G28820 10.0kb downstream 10.0kb downstream 11648 true Chr4: 14220695-14232342 Arabidopsis thaliana
AT4G28820 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14220695-14230694 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370051 5261 Brassicaceae View MSA
123838668 5264 Brassicales-Malvales View MSA
124322488 5266 SBM View MSA
124254037 5268 Malvidae View MSA
124070689 5270 Rosid View MSA
123741599 5271 Pentapetalae View MSA
122794679 5272 Eudicot View MSA
122048892 5273 Angiosperm View MSA
121346518 5274 Embryophyte View MSA
123380396 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.251        
cufflinks 2.34        
cufflinks 0.858       Low
cufflinks 2.156        
cufflinks 0.835       Low
cufflinks 2.17        

0 Strain