Gene : CRU3 A. thaliana TAIR10
Primary Identifier:  ? AT4G28520 Defline:  (1 of 13) PF00190 - Cupin (Cupin_1)
Genomic Order:  2877 Name:  ? AT4G28520
Secondary Identifier:  ? PAC:19643798
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28520 0.5kb upstream 0.5kb upstream 2741 true Chr4: 14087056-14089796 Arabidopsis thaliana
AT4G28520 0.5kb upstream 0.5kb upstream 500 false Chr4: 14087056-14087555 Arabidopsis thaliana
AT4G28520 0.5kb downstream 0.5kb downstream 2741 true Chr4: 14087556-14090296 Arabidopsis thaliana
AT4G28520 0.5kb downstream 0.5kb downstream 500 false Chr4: 14089797-14090296 Arabidopsis thaliana
AT4G28520 1.0kb upstream 1.0kb upstream 3241 true Chr4: 14086556-14089796 Arabidopsis thaliana
AT4G28520 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14086556-14087555 Arabidopsis thaliana
AT4G28520 1.0kb downstream 1.0kb downstream 3241 true Chr4: 14087556-14090796 Arabidopsis thaliana
AT4G28520 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14089797-14090796 Arabidopsis thaliana
AT4G28520 2.0kb upstream 2.0kb upstream 4241 true Chr4: 14085556-14089796 Arabidopsis thaliana
AT4G28520 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14085556-14087555 Arabidopsis thaliana
AT4G28520 2.0kb downstream 2.0kb downstream 4241 true Chr4: 14087556-14091796 Arabidopsis thaliana
AT4G28520 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14089797-14091796 Arabidopsis thaliana
AT4G28520 5.0kb upstream 5.0kb upstream 7241 true Chr4: 14082556-14089796 Arabidopsis thaliana
AT4G28520 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14082556-14087555 Arabidopsis thaliana
AT4G28520 5.0kb downstream 5.0kb downstream 7241 true Chr4: 14087556-14094796 Arabidopsis thaliana
AT4G28520 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14089797-14094796 Arabidopsis thaliana
AT4G28520 10.0kb upstream 10.0kb upstream 12241 true Chr4: 14077556-14089796 Arabidopsis thaliana
AT4G28520 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14077556-14087555 Arabidopsis thaliana
AT4G28520 10.0kb downstream 10.0kb downstream 12241 true Chr4: 14087556-14099796 Arabidopsis thaliana
AT4G28520 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14089797-14099796 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380568 5261 Brassicaceae View MSA
123839943 5264 Brassicales-Malvales View MSA
124350011 5266 SBM View MSA
124254285 5268 Malvidae View MSA
124062039 5270 Rosid View MSA
123752500 5271 Pentapetalae View MSA
122788518 5272 Eudicot View MSA
122051681 5273 Angiosperm View MSA
121312610 5274 Embryophyte View MSA
123349767 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain