Gene : HSL1 A. thaliana TAIR10
Primary Identifier:  ? AT4G32010 Defline:  (1 of 2) PTHR23336//PTHR23336:SF10 - ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. // B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1-RELATED
Genomic Order:  3257 Name:  ? AT4G32010
Secondary Identifier:  ? PAC:19647744
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G32010 0.5kb upstream 0.5kb upstream 6330 true Chr4: 15479024-15485353 Arabidopsis thaliana
AT4G32010 0.5kb upstream 0.5kb upstream 500 false Chr4: 15479024-15479523 Arabidopsis thaliana
AT4G32010 0.5kb downstream 0.5kb downstream 6330 true Chr4: 15479524-15485853 Arabidopsis thaliana
AT4G32010 0.5kb downstream 0.5kb downstream 500 false Chr4: 15485354-15485853 Arabidopsis thaliana
AT4G32010 1.0kb upstream 1.0kb upstream 6830 true Chr4: 15478524-15485353 Arabidopsis thaliana
AT4G32010 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15478524-15479523 Arabidopsis thaliana
AT4G32010 1.0kb downstream 1.0kb downstream 6830 true Chr4: 15479524-15486353 Arabidopsis thaliana
AT4G32010 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15485354-15486353 Arabidopsis thaliana
AT4G32010 2.0kb upstream 2.0kb upstream 7830 true Chr4: 15477524-15485353 Arabidopsis thaliana
AT4G32010 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15477524-15479523 Arabidopsis thaliana
AT4G32010 2.0kb downstream 2.0kb downstream 7830 true Chr4: 15479524-15487353 Arabidopsis thaliana
AT4G32010 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15485354-15487353 Arabidopsis thaliana
AT4G32010 5.0kb upstream 5.0kb upstream 10830 true Chr4: 15474524-15485353 Arabidopsis thaliana
AT4G32010 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15474524-15479523 Arabidopsis thaliana
AT4G32010 5.0kb downstream 5.0kb downstream 10830 true Chr4: 15479524-15490353 Arabidopsis thaliana
AT4G32010 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15485354-15490353 Arabidopsis thaliana
AT4G32010 10.0kb upstream 10.0kb upstream 15830 true Chr4: 15469524-15485353 Arabidopsis thaliana
AT4G32010 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15469524-15479523 Arabidopsis thaliana
AT4G32010 10.0kb downstream 10.0kb downstream 15830 true Chr4: 15479524-15495353 Arabidopsis thaliana
AT4G32010 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15485354-15495353 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375406 5261 Brassicaceae View MSA
123834099 5264 Brassicales-Malvales View MSA
124340233 5266 SBM View MSA
124239264 5268 Malvidae View MSA
124062028 5270 Rosid View MSA
123749673 5271 Pentapetalae View MSA
122797219 5272 Eudicot View MSA
122049123 5273 Angiosperm View MSA
121350931 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.43        
cufflinks 8.179        
cufflinks 4.786       Low
cufflinks 9.024        
cufflinks 5.12       Low
cufflinks 9.163        

0 Strain